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Quantifying the correlation between the complex structures of amorphous materials and their physical properties has been a long-standing problem in materials science. In amorphous Si, a representative covalent amorphous solid, the presence…

材料科学 · 物理学 2022-06-29 Emi Minamitani , Takuma Shiga , Makoto Kashiwagi , Ippei Obayashi

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

机器学习 · 计算机科学 2024-12-20 Rubén Ballester , Bastian Rieck

Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…

图形学 · 计算机科学 2017-10-04 Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen

Persistent Homology is a powerful tool in Topological Data Analysis (TDA) to capture topological properties of data succinctly at different spatial resolutions. For graphical data, shape, and structure of the neighborhood of individual data…

社会与信息网络 · 计算机科学 2018-11-12 Sumit Bhatia , Bapi Chatterjee , Deepak Nathani , Manohar Kaul

Weighted digraphs are used to model a variety of natural systems and can exhibit interesting structure across a range of scales. In order to understand and compare these systems, we require stable, interpretable, multiscale descriptors. To…

代数拓扑 · 数学 2024-11-08 Thomas Chaplin , Heather A. Harrington , Ulrike Tillmann

This article aims to study the topological invariant properties encoded in node graph representational embeddings by utilizing tools available in persistent homology. Specifically, given a node embedding representation algorithm, we…

机器学习 · 计算机科学 2021-10-12 Mustafa Hajij , Ghada Zamzmi , Xuanting Cai

We study the persistent homology of both functional data on compact topological spaces and structural data presented as compact metric measure spaces. One of our goals is to define persistent homology so as to capture primarily properties…

代数拓扑 · 数学 2018-11-27 Haibin Hang , Facundo Mémoli , Washington Mio

We characterize structures such as monotonicity, convexity, and modality in smooth regression curves using persistent homology. Persistent homology is a key tool in topological data analysis that detects higher-dimensional topological…

代数拓扑 · 数学 2025-10-28 Satish Kumar , Subhra Sankar Dhar

Computational topology provides a tool, persistent homology, to extract quantitative descriptors from structured objects (images, graphs, point clouds, etc). These descriptors can then be involved in optimization problems, typically as a…

计算几何 · 计算机科学 2026-03-27 Mathieu Carriere , Yuichi Ike , Théo Lacombe , Naoki Nishikawa

High-accuracy prediction of the physical properties of amorphous materials is challenging in condensed-matter physics. A promising method to achieve this is machine-learning potentials, which is an alternative to computationally demanding…

机器学习 · 计算机科学 2023-05-23 Emi Minamitani , Ippei Obayashi , Koji Shimizu , Satoshi Watanabe

In topological data analysis, persistent homology is used to study the "shape of data". Persistent homology computations are completely characterized by a set of intervals called a bar code. It is often said that the long intervals…

计算几何 · 计算机科学 2025-02-19 Peter Bubenik , Michael Hull , Dhruv Patel , Benjamin Whittle

Determining whether two graphs are isomorphic is a fundamental problem with practical applications in areas such as molecular chemistry or social network analysis, yet it remains a challenging task, with exact solutions often being…

Mapping the thermal transport properties of materials at the nanoscale is of critical importance for optimizing heat conduction in nanoscale devices. Several methods to determine the thermal conductivity of materials have been developed,…

介观与纳米尺度物理 · 物理学 2021-03-17 Oliver Braun , Roman Furrer , Pascal Butti , Kishan R. Thodkar , Ivan Shorubalko , Ilaria Zardo , Michel Calame , Mickael L. Perrin

Many datasets can be viewed as a noisy sampling of an underlying space, and tools from topological data analysis can characterize this structure for the purpose of knowledge discovery. One such tool is persistent homology, which provides a…

Computational topology has recently known an important development toward data analysis, giving birth to the field of topological data analysis. Topological persistence, or persistent homology, appears as a fundamental tool in this field.…

统计理论 · 数学 2013-05-28 Frédéric Chazal , Marc Glisse , Catherine Labruère , Bertrand Michel

We apply persistent homology to the task of discovering and characterizing phase transitions, using lattice spin models from statistical physics for working examples. Persistence images provide a useful representation of the homological…

统计力学 · 物理学 2020-12-03 Alex Cole , Gregory J. Loges , Gary Shiu

We propose a novel method for topological analysis of unweighted graphs which is based on \textit{persistent homology}. The proposed method maps the input graph to a complete weighted graph where the weighting function maps each edge to a…

代数拓扑 · 数学 2020-07-31 Padraig Corcoran

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

机器学习 · 计算机科学 2019-06-12 Henri Riihimäki , José Licón-Saláiz

All-carbon heterostructures have been produced recently via focused ion beam patterning of single layer graphene. Amorphized graphene is similar to a graphene sheet in which some hexagons are replaced by a combination of pentagonal,…

材料科学 · 物理学 2017-04-07 B Mortazavi , Z Fan , LFC Pereira , A Harju , T Rabczuk

Visualization in the emerging field of topological data analysis has progressed from persistence barcodes and persistence diagrams to display of two-parameter persistent homology. Although persistence barcodes and diagrams have permitted…

应用统计 · 统计学 2019-01-08 Raoul R. Wadhwa , Andrew Dhawan , Drew F. K. Williamson , Jacob G. Scott
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