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Active polymers play a central role in many biological systems, from bacterial flagella to cellular cytoskeletons. Minimal models of semiflexible active filaments have been used to study a variety of interesting phenomena in active systems,…

软凝聚态物质 · 物理学 2020-02-19 Matthew S. E. Peterson , Michael F. Hagan , Aparna Baskaran

We study the dynamics of a single chain polymer confined to a two dimensional cell. We introduce a kinetically constrained lattice gas model that preserves the connectivity of the chain, and we use this kinetically constrained model to…

统计力学 · 物理学 2011-11-09 Armin Rahmani , Claudio Castelnovo , Jeremy Schmit , Claudio Chamon

We perform numerical simulations of isolated, partially active polymers, driven out-of-equilibrium by a fraction of their monomers. We show that, if the active beads are all gathered in a contiguous block, the position of the section along…

软凝聚态物质 · 物理学 2023-09-04 Marin Vatin , Sumanta Kundu , Emanuele Locatelli

The influence of an external flow on the relaxation dynamics of a single polymer is investigated theoretically and numerically. We show that a pronounced dynamical slowdown occurs in the vicinity of the coil-stretch transition, especially…

混沌动力学 · 物理学 2007-05-23 Antonio Celani , Alberto Puliafito , Dario Vincenzi

We consider how active forces modeled as non-thermal random noise affect the average dynamical properties of a Rouse polymer. As the power spectrum of the noise is not known we keep the analytical treatment as generic as possible and then…

统计力学 · 物理学 2017-05-23 Dino Osmanovic , Yitzhak Rabin

We review various methods to investigate the statics and the dynamics of collective composition fluctuations in dense polymer mixtures within fluctuating-field approaches. The central idea of fluctuating-field theories is to rewrite the…

软凝聚态物质 · 物理学 2007-05-23 Marcus Mueller , Friederike Schmid

We consider a continuum model of active viscoelastic matter, whereby an active nematic liquid-crystal is coupled to a minimal model of polymer dynamics with a viscoelastic relaxation time $\tau_C$. To explore the resulting interplay between…

软凝聚态物质 · 物理学 2016-03-30 E. J. Hemingway , M. E. Cates , S. M. Fielding

We consider a polymer of length $N$ translocating through a narrow pore in the absence of external fields. Characterization of its purportedly anomalous dynamics has so far remained incomplete. We show that the polymer dynamics is anomalous…

软凝聚态物质 · 物理学 2007-10-08 Debabrata Panja , Gerard T. Barkema , Robin C. Ball

A phenomenological model of human posture control is posited. The dynamics are modelled as an elastically pinned polymer under the influence of noise. The model accurately reproduces the two-point correlation functions of experimental…

adap-org · 物理学 2009-10-28 Carson C. Chow , J. J. Collins

We study the translocation process of a polymer in the absence of external fields for various pore diameters $b$ and membrane thickness $L$. The polymer performs Rouse and reptation dynamics. The mean translocation time $<\tau_t>$ that the…

软凝聚态物质 · 物理学 2007-05-23 Joanne Klein Wolterink , Gerard T. Barkema , Debabrata Panja

We develop a segment-scale, force-based theory for the breakdown of the unentangled Rouse model and subsequent emergence of isotropic mesoscopic localization and entropic elasticity in chain polymer liquids in the absence of…

软凝聚态物质 · 物理学 2017-04-26 Zachary E. Dell , Kenneth S. Schweizer

In this paper, we employ Molecular Dynamics computer simulations to study and compare the statics and dynamics of linear and circular (ring) polymer chains in entangled solutions of different densities. While we confirm that linear chain…

软凝聚态物质 · 物理学 2016-02-17 Negar Nahali , Angelo Rosa

Linear viscoelastic properties for a dilute polymer solution are predicted by modeling the solution as a suspension of non-interacting bead-spring chains. The present model, unlike the Rouse model, can describe the solution's rheological…

软凝聚态物质 · 物理学 2020-07-03 J Ravi Prakash

Linear polymers and other connected "line liquids" exhibit a coupling between density and equilibrium nematic order on the macroscopic level that gives rise to a Meyer-de Gennes vectorial conservation law. Nevertheless, isotropic linear…

软凝聚态物质 · 物理学 2019-04-08 Aleksandar Popadić , Daniel Svenšek , Rudolf Podgornik , Matej Praprotnik

Polymer-like structures are ubiquitous in nature and synthetic materials. Their configurational and migration properties are often affected by crowded environments leading to non-thermal fluctuations. Here, we study an ideal Rouse chain in…

软凝聚态物质 · 物理学 2024-03-12 Pietro Luigi Muzzeddu , Andrea Gambassi , Jens-Uwe Sommer , Abhinav Sharma

Molecular dynamics simulations are performed for a polymer melt composed of short chains in quiescent and sheared conditions. The stress relaxation function $G(t)$ exhibits a stretched exponential form in a relatively early stage and…

软凝聚态物质 · 物理学 2009-10-31 Ryoichi Yamamoto , Akira Onuki

Suspensions of swimming particles exhibit complex collective behaviors driven by hydrodynamic interactions, showing persistent large-scale flows and long-range correlations. While heavily studied, it remains unclear how such structures…

软凝聚态物质 · 物理学 2025-05-27 Bryce Palmer , Scott Weady , Michael O'Brien , Blakesley Burkhart , Michael J. Shelley

It has been assumed until very recently that all long-range correlations are screened in three-dimensional melts of linear homopolymers on distances beyond the correlation length $\xi$ characterizing the decay of the density fluctuations.…

Dynamics of a discrete polymer in time-dependent external potentials is studied with the master equation approach. We consider both stochastic and deterministic switching mechanisms for the potential states and give the essential equations…

统计力学 · 物理学 2008-06-25 Janne Kauttonen , Juha Merikoski , Otto Pulkkinen

The Rouse model has recently been modified to take into account the excluded volume interactions that exist between various parts of a polymer chain by incorporating a narrow Gaussian repulsive potential between pairs of beads on the Rouse…

软凝聚态物质 · 物理学 2020-07-03 J Ravi Prakash