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We introduce a broad class of spatial models to describe how spatially heterogeneous populations live, die, and reproduce. Individuals are represented by points of a point measure, whose birth and death rates can depend both on spatial…

We examine the switching dynamics of a stochastic population subjected to a deterministically time-varying environment. Our approach is demonstrated in the realm of ecology on a problem of population establishment. Here, by assuming a…

统计力学 · 物理学 2020-02-19 Tom Israeli , Michael Assaf

Recent years have witnessed an explosion of extensive geolocated datasets related to human movement, enabling scientists to quantitatively study individual and collective mobility patterns, and to generate models that can capture and…

The report considers the dynamics of the global population as the unique case of the Socio-Economic Soft Matter system. This category was introduced for complex systems dominated by mesoscale assemblies, emerging due to the inherent…

物理与社会 · 物理学 2022-09-07 Agata Angelika Rzoska , Aleksandra Drozd-Rzoska

Demographic models built from genetic data play important roles in illuminating prehistorical events and serving as null models in genome scans for selection. We introduce an inference method based on the joint frequency spectrum of genetic…

种群与进化 · 定量生物学 2010-05-10 Ryan N. Gutenkunst , Ryan D. Hernandez , Scott H. Williamson , Carlos D. Bustamante

Dynamic models are widely used to mathematically describe biological phenomena that evolve over time. One important area of application is leukaemia research, where leukaemia cells are genetically modified in preclinical studies to explore…

统计方法学 · 统计学 2026-02-02 Julian Wäsche , Romina Ludwig , Irmela Jeremias , Christiane Fuchs

This paper introduces a neural network approach for fitting the Lee-Carter and the Poisson Lee-Carter model on multiple populations. We develop some neural networks that replicate the structure of the individual LC models and allow their…

机器学习 · 统计学 2021-06-28 Salvatore Scognamiglio

Mathematical modelling has a long history in the context of collective cell migration, with applications throughout development, disease and regenerative medicine. The aim of modelling in this context is to provide a framework in which to…

定量方法 · 定量生物学 2025-06-24 Ruth E. Baker , Rebecca M. Crossley , Carles Falco , Simon F. Martina-Perez

This paper considers a nonlinear model for population dynamics with age structure. The fertility rate with respect to age is non constant and has the form proposed by [17]. Moreover, its multiplicative structure and the multiplicative…

综合数学 · 数学 2023-12-06 Dragos-Patru Covei , Traian A. Pirvu , Catalin Sterbeti

Cell lineage statistics is a powerful tool for inferring cellular parameters, such as division rate, death rate or the population growth rate. Yet, in practice such an analysis suffers from a basic problem: how should we treat incomplete…

种群与进化 · 定量生物学 2023-09-14 Arthur Genthon , Takashi Nozoe , Luca Peliti , David Lacoste

Social media provide access to behavioural data at an unprecedented scale and granularity. However, using these data to understand phenomena in a broader population is difficult due to their non-representativeness and the bias of…

计算机与社会 · 计算机科学 2019-05-16 Zijian Wang , Scott A. Hale , David Adelani , Przemyslaw A. Grabowicz , Timo Hartmann , Fabian Flöck , David Jurgens

Population structure can be modelled by evolutionary graphs, which can have a substantial, but very subtle influence on the fate of the arising mutants. Individuals are located on the nodes of these graphs, competing with each other to…

种群与进化 · 定量生物学 2018-10-31 Marius Möller , Laura Hindersin , Arne Traulsen

Evolution has fascinated quantitative and physical scientists for decades: how can the random process of mutation, recombination, and duplication of genetic information generate the diversity of life? What determines the rate of evolution?…

种群与进化 · 定量生物学 2018-04-23 Richard A. Neher , Aleksandra M. Walczak

Traditionally, population models distinguish individuals on the basis of their current state. Given a distribution, a discrete time model then specifies (precisely in deterministic models, probabilistically in stochastic models) the…

种群与进化 · 定量生物学 2023-09-21 B. Boldin , O. Diekmann , J. A. J. Metz

Statistical models are used to produce estimates of demographic and global health indicators in populations with limited data. Such models integrate multiple data sources to produce estimates and forecasts with uncertainty based on model…

统计方法学 · 统计学 2024-12-02 Leontine Alkema , Herbert Susmann , Evan Ray

We consider several one-species population dynamics model with finite and infinite carrying capacity, time dependent growth and effort rates and solve them analytically. We show that defining suitable scaling functions for a given time, one…

无序系统与神经网络 · 物理学 2011-11-14 Alexandre Souto Martinez , Brenno Caetano Trocca Cabella , Fabiano Ribeiro

A general population evolution model is considered. Any individual of the population is characterized by its score. Certain general conditions are assumed concerning the number of the individuals and their scores. Asymptotic theorems are…

概率论 · 数学 2016-04-07 I. Fazekas , Cs. Noszály , A. Perecsényi

Modern population genetics studies typically involve genome-wide genotyping of individuals from a diverse network of ancestries. An important, unsolved problem is how to formulate and estimate probabilistic models of observed genotypes that…

种群与进化 · 定量生物学 2017-01-10 Wei Hao , Minsun Song , John D. Storey

When predicting the fate and consequences of recurring deleterious mutations in self-fertilising populations most models developed make the assumption that populations have discrete non-overlapping generations. This makes them biologically…

种群与进化 · 定量生物学 2016-04-22 Diala Abu Awad , Viet-Chi Tran , Sylvain Billiard

We examine the effects of instantiating Lewis signaling games within a population of speaker and listener agents with the aim of producing a set of general and robust representations of unstructured pixel data. Preliminary experiments…

机器学习 · 计算机科学 2019-11-12 Nicole Fitzgerald