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Supramolecular chemistry protocols applied on surfaces offer compelling avenues for atomic scale control over organic-inorganic interface structures. In this approach, adsorbate-surface interactions and two-dimensional confinement can lead…

The study of molecule-target interaction is quite important for drug discovery in terms of target identification, hit identification, pathway study, drug-drug interaction, etc. Most existing methodologies utilize either biomedical network…

机器学习 · 计算机科学 2023-02-07 Jinjiang Guo , Jie Li

Topological indices have been used to modeling biological and chemical properties of molecules in quantitive structure property relationship studies and quantitive structure activity studies. All the degree based topological indices have…

综合数学 · 数学 2017-07-27 Süleyman Ediz

Nanowires of BiSe show topological states localized near the surface of the material. The topological nature of these states can be analyzed using well-known quantities. In this paper, we calculate the topological entropy suggested by…

量子物理 · 物理学 2023-08-04 Nicolás Legnazzi , Omar Osenda

The stability of chemically complex nanoparticles is governed by an immense configurational space arising from heterogeneous local atomic environments across surface and interior regions. Efficiently identifying low-energy configurations…

We propose an algorithm to estimate the topology of an embedded metric graph from a well-sampled finite subset of the underlying graph.

计算几何 · 计算机科学 2019-12-09 Brittany Terese Fasy , Rafal Komendarczyk , Sushovan Majhi , Carola Wenk

This study investigates entropy's potential for analyzing scientific research patterns across disciplines. Originating from thermodynamics, entropy now measures uncertainty and diversity in information systems. We examine Shannon Entropy,…

物理与社会 · 物理学 2025-03-27 Yujie Shi , Alex Jie Yang , Sanhong Deng

In this paper we propose and study a class of simple, nonparametric, yet interpretable measures of association between two random variables $X$ and $Y$ taking values in general topological spaces. These nonparametric measures -- defined…

统计理论 · 数学 2020-10-09 Nabarun Deb , Promit Ghosal , Bodhisattva Sen

With the growing adoption of AI-based systems across everyday life, the need to understand their decision-making mechanisms is correspondingly increasing. The level at which we can trust the statistical inferences made from AI-based…

机器学习 · 统计学 2024-04-15 Adam Spannaus , Heidi A. Hanson , Lynne Penberthy , Georgia Tourassi

Despite growing interest in data stream mining the most successful incremental learners, such as VFDT, still use periodic recomputation to update attribute information gains and Gini indices. This note provides simple incremental formulas…

人工智能 · 计算机科学 2016-08-02 Blaz Sovdat

Although neural networks are capable of reaching astonishing performances on a wide variety of contexts, properly training networks on complicated tasks requires expertise and can be expensive from a computational perspective. In industrial…

机器学习 · 统计学 2021-05-11 Théo Lacombe , Yuichi Ike , Mathieu Carriere , Frédéric Chazal , Marc Glisse , Yuhei Umeda

We study the tailoring of structured random graph ensembles to real networks, with the objective of generating precise and practical mathematical tools for quantifying and comparing network topologies macroscopically, beyond the level of…

无序系统与神经网络 · 物理学 2015-05-13 A. Annibale , A. C. C. Coolen , L. P. Fernandes , F. Fraternali , J. Kleinjung

In this paper, we apply persistent entropy, a novel topological statistic, for characterization of images of epithelial tissues. We have found out that persistent entropy is able to summarize topological and geometric information encoded by…

图像与视频处理 · 电气工程与系统科学 2021-05-19 N. Atienza , L. M. Escudero , M. J. Jimenez , M. Soriano-Trigueros

A characterization of topological order in terms of bi-partite entanglement was proposed recently [A. Kitaev and J. Preskill, Phys. Rev. Lett. 96, 110404 (2006); M. Levin and X.-G. Wen, ibid, 110405]. It was argued that in a topological…

强关联电子 · 物理学 2011-11-09 Shunsuke Furukawa , Gregoire Misguich

Contrastive learning on graphs aims at extracting distinguishable high-level representations of nodes. In this paper, we theoretically illustrate that the entropy of a dataset can be approximated by maximizing the lower bound of the mutual…

机器学习 · 计算机科学 2023-07-27 Yixuan Ma , Xiaolin Zhang , Peng Zhang , Kun Zhan

Graph learning on molecules makes use of information from both the molecular structure and the features attached to that structure. Much work has been conducted on biasing either towards structure or features, with the aim that bias…

机器学习 · 计算机科学 2025-02-03 Alex O. Davies , Nirav S. Ajmeri , Telmo de Menezes e Silva Filho

This article examines the inverse problem for a lossy quantum graph that is internally excited and sensed. In particular, we supply an algorithmic methodology for deducing the topology and geometric structure of the underlying metric graph.…

度量几何 · 数学 2010-08-18 Michael Robinson

Network science provides valuable insights across numerous disciplines including sociology, biology, neuroscience and engineering. A task of major practical importance in these application domains is inferring the network structure from…

机器学习 · 计算机科学 2019-05-01 Vassilis N. Ioannidis , Yanning Shen , Georgios B. Giannakis

Topological indices play an important role in mathematical chemistry especially in the quantitative structure-property relationship (QSPR) and quantitative structure-activity relationship (QSAR). Recent research indicates that the augmented…

组合数学 · 数学 2016-07-26 Akbar Ali , Zahid Raza , Akhlaq Ahmad Bhatti

Graph neural networks (GNNs) have shown advantages in graph-based analysis tasks. However, most existing methods have the homogeneity assumption and show poor performance on heterophilic graphs, where the linked nodes have dissimilar…

机器学习 · 计算机科学 2024-04-16 Tianhao Peng , Wenjun Wu , Haitao Yuan , Zhifeng Bao , Zhao Pengrui , Xin Yu , Xuetao Lin , Yu Liang , Yanjun Pu