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Single-molecule localization microscopy allows practitioners to locate and track labeled molecules in biological systems. When extracting diffusion coefficients from the resulting trajectories, it is common practice to perform a linear fit…

生物物理 · 物理学 2024-06-19 Jakob Tómas Bullerjahn , Gerhard Hummer

Anisotropic diffusion processes emerge in various fields such as transport in biological tissue and diffusion in liquid crystals. In such systems, the motion is described by a diffusion tensor. For a proper characterization of processes…

数据分析、统计与概率 · 物理学 2013-11-14 Mario Heidernätsch , Michael Bauer , Günter Radons

We present a novel method, based on a multiscale approach, for detecting anisotropy signatures in the arrival direction distribution of the highest energy cosmic rays. This method is catalog independent, i.e. it does not depend on the…

天体物理仪器与方法 · 物理学 2015-05-27 M. De Domenico , H. Lyberis

Microscopy research often requires recovering particle-size distributions in three dimensions from only a few (10 - 200) profile measurements in the section. This problem is especially relevant for petrographic and mineralogical studies,…

统计方法学 · 统计学 2022-02-16 Ekaterina Poliakova

Modern developments in microscopy and image processing are revolutionizing areas of physics, chemistry and biology as nanoscale objects can be tracked with unprecedented accuracy. The goal of single particle tracking is to determine the…

统计力学 · 物理学 2015-06-04 Denis Boyer , David S. Dean , Carlos Mejía-Monasterio , Gleb Oshanin

Confinement can substantially alter the physicochemical properties of materials by breaking translational isotropy and rendering all physical properties position-dependent. Molecular dynamics (MD) simulations have proven instrumental in…

统计力学 · 物理学 2024-02-06 Tiago Domingues , Ronald Coifman , Amir Haji-Akbari

Spatially referenced data often have autocovariance functions with elliptical isolevel contours, a property known as geometric anisotropy. The anisotropy parameters include the tilt of the ellipse (orientation angle) with respect to a…

统计理论 · 数学 2021-10-04 Manolis P. Petrakis , Dionissios T. Hristopulos

The transport equation of active motion is generalised to consider time-fractional dynamics for describing the anomalous diffusion of self-propelled particles observed in many different systems. In the present study, we consider an…

统计力学 · 物理学 2023-10-27 Francisco J. Sevilla , Guillermo Chacón-Acosta , Trifce Sandev

We theoretically analyze diffusion trajectories of an anisotropic object moving on a two dimensional space in the absence of an external field. In determining diffusion parameters associated with the shape anisotropy, we devise a measure…

统计力学 · 物理学 2015-08-31 Sunghan Roh , Juyeon Yi , Yong Woon Kim

The motion of self-propelled particles is modeled as a persistent random walk. An analytical framework is developed that allows the derivation of exact expressions for the time evolution of arbitrary moments of the persistent walk's…

软凝聚态物质 · 物理学 2015-07-28 Zeinab Sadjadi , M. Reza Shaebani , Heiko Rieger , Ludger Santen

The diffusion motions of individual polymer aggregates in disordered porous media were visualized using the single particle tracking (SPT) method because the motions inside porous media play important roles in various fields of science and…

软凝聚态物质 · 物理学 2024-10-24 Yusaku Abe , Naoki Tomioka , Yu Matsuda

Behavior of the mixture of particles and dimers moving with different jump rates at reconstructed surfaces is described. Collective diffusion coefficient is calculated by the variational approach. Anisotropy of the collective particle…

统计力学 · 物理学 2014-05-12 Marcin Mińkowski , Magdalena A. Załuska Kotur

Anisotropic Diffusion is widely used for noise reduction with simultaneous preservation of vascular structures in maximum intensity projected (MIP) angiograms. However, extension to minimum intensity projected (mIP) venograms in…

计算机视觉与模式识别 · 计算机科学 2015-01-15 P. K. Akshara , J. S. Paul

The Mean Square Displacement is a central tool in the analysis of Single Particle Tracking experiments, shedding light on various biophysical phenomena. Frequently, parameters are extracted by performing time-averages on single particle…

生物物理 · 物理学 2013-05-24 Eldad Kepten Irena Bronshtein , Yuval Garini

We describe a method to extract force and diffusion parameters from single trajectories of Brownian particles based on the principle of maximum likelihood. The analysis is well-suited for out-of-equilibrium trajectories, even when a limited…

软凝聚态物质 · 物理学 2016-08-30 Raphael Sarfati , Jerzy Blawzdziewicz , Eric R. Dufresne

This paper proposes a widely applicable method of approximate maximum-likelihood estimation for multivariate diffusion process from discretely sampled data. A closed-form asymptotic expansion for transition density is proposed and…

统计理论 · 数学 2013-08-14 Chenxu Li

We consider a microscopic model (a system of self-propelled particles) to study the behaviour of a large group of pedestrians walking in a corridor. Our point of interest is the effect of anisotropic interactions on the global behaviour of…

物理与社会 · 物理学 2013-04-17 Lennart Gulikers , Joep Evers , Adrian Muntean , Alexey Lyulin

An increasing number of experimental studies employ single particle tracking to probe the physical environment in complex systems. We here propose and discuss new methods to analyze the time series of the particle traces, in particular, for…

A method for particle orientation tracking is developed and demonstrated specifically for anisotropic particles. Using (high-speed) multi-camera recordings of anisotropic particles from different viewpoints, we reconstruct the 3D location…

计算机视觉与模式识别 · 计算机科学 2025-05-13 Mees M. Flapper , Elian Bernard , Sander G. Huisman

This work concerns the modeling of radiative transfer in anisotropic turbid media using diffusion theory. A theory for the relationship between microscopic scattering properties (i.e., an arbitrary differential scattering cross-section) and…

光学 · 物理学 2014-08-14 Erik Alerstam
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