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Individual contributions to the spread of an epidemic vary widely due to an individual's location in a social network and their intrinsic ability to spread or contract diseases. While the effect of heterogeneous population structure and…

种群与进化 · 定量生物学 2026-05-14 Abhay Gupta , Nicholas W. Landry

The simplest epidemiologic model composed by mutually exclusive compartments SIR (susceptible-infected-susceptible) is presented to describe a reality. From health concerns to situations related with marketing, informatics or even…

物理与社会 · 物理学 2016-11-09 Helena Sofia Rodrigues

The Susceptible-Infected-Recovered (SIR) model has successfully mimicked the propagation of such airborne diseases as influenza A (H1N1). Although the SIR model has recently been studied in a multilayer networks configuration, in almost all…

物理与社会 · 物理学 2015-07-16 L. G. Alvarez Zuzek , H. E. Stanley , L. A. Braunstein

We describe the population-based SEIR (susceptible, exposed, infected, removed) model developed by the Irish Epidemiological Modelling Advisory Group (IEMAG), which advises the Irish government on COVID-19 responses. The model assumes a…

Compartmental transmission models have become an invaluable tool to study the dynamics of infectious diseases. The Susceptible-Infectious-Recovered (SIR) model is known to have an exact semi-analytical solution. In the current study, the…

种群与进化 · 定量生物学 2020-11-03 Kevin Heng , Christian L. Althaus

The purpose of this work is to give a contribution to the understanding of the COVID-19 contagion in Italy. To this end, we developed a modified Susceptible-Infected-Recovered (SIR) model for the contagion, and we used official data of the…

物理与社会 · 物理学 2020-04-01 Giuseppe C. Calafiore , Carlo Novara , Corrado Possieri

Identifiability is a necessary condition for successful parameter estimation of dynamic system models. A major component of identifiability analysis is determining the identifiable parameter combinations, the functional forms for the…

定量方法 · 定量生物学 2013-10-07 Marisa C. Eisenberg , Michael A. L. Hayashi

Mathematical models are invaluable for understanding and predicting how biological systems behave, although their construction requires specifying mechanisms and relationships that are often not perfectly known. In the presence of multiple…

We consider an SEIR epidemic model on a network also allowing random contacts, where recovered individuals could either recover naturally or be diagnosed. Upon diagnosis, manual contact tracing is triggered such that each infected network…

物理与社会 · 物理学 2024-06-06 Dongni Zhang , Tom Britton

Identifying highly susceptible individuals in spreading processes is of great significance in controlling outbreaks. In this paper, we explore the susceptibility of people in susceptible-infectious-recovered (SIR) and rumor spreading…

物理与社会 · 物理学 2015-05-20 Shaoting Tang , Xian Teng , Sen Pei , Shu Yan , Zhiming Zheng

Many epidemic models are naturally defined as individual-based models: where we track the state of each individual within a susceptible population. Inference for individual-based models is challenging due to the high-dimensional state-space…

统计方法学 · 统计学 2025-08-04 Lorenzo Rimella , Christopher Jewell , Paul Fearnhead

Learning the unknown causal parameters of a linear structural causal model is a fundamental task in causal analysis. The task, known as the problem of identification, asks to estimate the parameters of the model from a combination of…

人工智能 · 计算机科学 2024-07-18 Julian Dörfler , Benito van der Zander , Markus Bläser , Maciej Liskiewicz

COVID-19 has shown a relatively low mortality rate in young healthy individuals, with the majority of this group being asymptomatic or having mild symptoms, while the severity of the disease among individuals with underlying health…

物理与社会 · 物理学 2020-06-22 Dario Ortega Anderez , Eiman Kanjo , Ganna Pogrebna , Shane Johnson , John Alan Hunt

We adopt a maximum-likelihood framework to estimate parameters of a stochastic susceptible-infected-recovered (SIR) model with contact tracing on a rooted random tree. Given the number of detectees per index case, our estimator allows to…

动力系统 · 数学 2023-11-23 Augustine Okolie , Johannes Müller , Mirjam Kretzschmar

Detection of patient-zero can give new insights to the epidemiologists about the nature of first transmissions into a population. In this paper, we study the statistical inference problem of detecting the source of epidemics from a snapshot…

社会与信息网络 · 计算机科学 2015-06-24 Nino Antulov-Fantulin , Alen Lancic , Tomislav Smuc , Hrvoje Stefancic , Mile Sikic

If model identifiability is not confirmed, inferences from infectious disease transmission models may not be reliable, so they might lead to misleading recommendations. Structural identifiability analysis characterizes whether it is…

定量方法 · 定量生物学 2022-06-09 Emmanuelle A. Dankwa , Andrew F. Brouwer , Christl A. Donnelly

Mathematical modeling plays a vital role in epidemiology, offering insights into the spread and control of infectious diseases. The compartmental models developed by Kermack and McKendrick, particularly the SI (Susceptible-Infected) and SIR…

数值分析 · 数学 2026-03-05 Berkay Özışık , Elif Demirci

Monte Carlo methods to evaluate and maximize the likelihood function enable the construction of confidence intervals and hypothesis tests, facilitating scientific investigation using models for which the likelihood function is intractable.…

统计方法学 · 统计学 2017-02-13 Edward L. Ionides , Carles Breto , Joonha Park , Richard A. Smith , Aaron A. King

Competing risk analysis considers event times due to multiple causes, or of more than one event types. Commonly used regression models for such data include 1) cause-specific hazards model, which focuses on modeling one type of event while…

应用统计 · 统计学 2017-04-27 Jiayi Hou , Anthony Paravati , Ronghui Xu , James Murphy

A prompt public health response to a new epidemic relies on the ability to monitor and predict its evolution in real time as data accumulate. The 2009 A/H1N1 outbreak in the UK revealed pandemic data as noisy, contaminated, potentially…