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Modeling epidemic dynamics plays an important role in studying how diseases spread, predicting their future course, and designing strategies to control them. In this letter, we introduce a model of SIR (susceptible-infected-removed) type…

种群与进化 · 定量生物学 2013-12-17 Li Chen , Fakhteh Ghanbarnejad , Weiran Cai , Peter Grassberger

We use the susceptible-infected-recovered (SIR) model for disease spread over a network, and empirically study how well various centrality measures perform at identifying which nodes in a network will be the best spreaders of disease on 10…

社会与信息网络 · 计算机科学 2012-08-23 Brian Macdonald , Paulo Shakarian , Nicholas Howard , Geoffrey Moores

We study cascades in social networks with the independent cascade (IC) model and the Susceptible-Infected-recovered (SIR) model. The well-studied IC model fails to capture the feature of node recovery, and the SIR model is a variant of the…

社会与信息网络 · 计算机科学 2025-03-18 Panfeng Liu , Guoliang Qiu , Biaoshuai Tao , Kuan Yang

Identification of nonlinear systems is a challenging problem. Physical knowledge of the system can be used in the identification process to significantly improve the predictive performance by restricting the space of possible mappings from…

统计计算 · 统计学 2022-10-27 Anna Wigren , Johan Wågberg , Fredrik Lindsten , Adrian Wills , Thomas B. Schön

We study the identifiability of parameters and falsifiability of predictions under the process of model expansion in a Bayesian setting. Identifiability is represented by the closeness of the posterior to the prior distribution and…

统计理论 · 数学 2025-10-15 Collin Cademartori

When fitting a multi-parameter model to a data set, computer algorithms may suggest that a range of parameters provide equally reasonable fits, making the parameter estimation difficult. Here, we prove this fact for an SIR model. We say a…

种群与进化 · 定量生物学 2024-04-08 B Shayak , Sana Jahedi , James A Yorke

The effect of spatial correlations on the spread of infectious diseases was investigated using a stochastic SIR (Susceptible-Infective-Recovered) model on complex networks. It was found that in addition to the reduction of the effective…

种群与进化 · 定量生物学 2007-05-23 J. Verdasca , M. M. Telo da Gama , A. Nunes , N. R. Bernardino , J. M. Pacheco , M. C. Gomes

The susceptible-infectious-recovered (SIR) model describes the evolution of three species of individuals which are subject to an infection and recovery mechanism. A susceptible $S$ can become infectious with an infection rate $\beta$ by an…

统计力学 · 物理学 2008-06-30 Gunter M. Schütz , Marian Brandau , Steffen Trimper

Structural equation modeling (SEM) is a statistical method widely used in educational research to investigate relationships between variables. SEM models are typically constructed based on theoretical foundations and assessed through fit…

物理教育 · 物理学 2024-05-31 Yangqiuting Li , Chandralekha Singh

The paper presents an investigation of estimating treatment effect using different matching methods. The study proposed a new method which is computationally efficient and convenient in implication-'largest caliper matching' and compared…

应用统计 · 统计学 2018-06-07 Sharif Mahmood

We analyze the identifiability and observability of the well-known SIR epidemic model with an additional compartment Q of the sub-population of infected individuals that are placed in quarantine (SIQR model), considering that the flow of…

Individual-based models of contagious processes are useful for predicting epidemic trajectories and informing intervention strategies. In such models, the incorporation of contact network information can capture the non-randomness and…

种群与进化 · 定量生物学 2023-11-09 Maxwell H. Wang , Jukka-Pekka Onnela

We introduce a new method to efficiently approximate the number of infections resulting from a given initially-infected node in a network of susceptible individuals. Our approach is based on counting the number of possible infection walks…

生物物理 · 物理学 2012-10-25 Frank Bauer , Joseph T. Lizier

Disease models are used to examine the likely impact of therapies, interventions and public policy changes. Ensuring that these are well calibrated on the basis of available data and that the uncertainty in their projections is properly…

统计计算 · 统计学 2025-01-24 Daria Semochkina , Cathal Walsh

We formulate a generalized susceptible exposed infectious recovered (SEIR) model on a graph, describing the population dynamics of an open crowded place with an arbitrary topology. As a sample calculation, we discuss three simple cases,…

物理与社会 · 物理学 2020-12-18 Andrea Nava , Alessandro Papa , Marco Rossi , Domenico Giuliano

Linear mixture models have proven very useful in a plethora of applications, e.g., topic modeling, clustering, and source separation. As a critical aspect of the linear mixture models, identifiability of the model parameters is…

机器学习 · 计算机科学 2021-02-24 Bo Yang , Xiao Fu , Nicholas D. Sidiropoulos , Kejun Huang

We provide an overview of the methods that can be used for prediction under uncertainty and data fitting of dynamical systems, and of the fundamental challenges that arise in this context. The focus is on SIR-like models, that are being…

统计方法学 · 统计学 2022-10-14 Chiara Piazzola , Lorenzo Tamellini , Raúl Tempone

The standard way to estimate the parameters $\Theta_\text{SEIR}$ (e.g., the transmission rate $\beta$) of an SEIR model is to use grid search, where simulations are performed on each set of parameters, and the parameter set leading to the…

机器学习 · 统计学 2021-06-01 Chun Fan , Yuxian Meng , Xiaofei Sun , Fei Wu , Tianwei Zhang , Jiwei Li

Computational and mathematical models rely heavily on estimated parameter values for model development. Identifiability analysis determines how well the parameters of a model can be estimated from experimental data. Identifiability analysis…

定量方法 · 定量生物学 2021-02-12 Marissa Renardy , Denise Kirschner , Marisa Eisenberg

Using real-world study data usually requires contractual agreements where research results may only be published in anonymized form. Requiring formal privacy guarantees, such as differential privacy, could be helpful for data-driven…

密码学与安全 · 计算机科学 2024-07-08 Jonas Allmann , Saskia Nuñez von Voigt , Florian Tschorsch