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This paper presents a new clustering algorithm for space-time data based on the concepts of topological data analysis and in particular, persistent homology. Employing persistent homology - a flexible mathematical tool from algebraic…

机器学习 · 统计学 2019-10-28 Umar Islambekov , Yulia Gel

In this work we use the persistent homology method, a technique in topological data analysis (TDA), to extract essential topological features from the data space and combine them with deep learning features for classification tasks. In TDA,…

计算机视觉与模式识别 · 计算机科学 2023-11-14 Mariana Dória Prata Lima , Gilson Antonio Giraldi , Gastão Florêncio Miranda Junior

Quantification of the number of variables needed to locally explain complex data is often the first step to better understanding it. Existing techniques from intrinsic dimension estimation leverage statistical models to glean this…

机器学习 · 计算机科学 2023-12-13 Eric Yeats , Cameron Darwin , Frank Liu , Hai Li

Topological Data Analysis (TDA) can be used to detect and characterize holes in an image, such as zero-dimensional holes (connected components) or one-dimensional holes (loops). However, there is currently no widely accepted statistical…

统计方法学 · 统计学 2025-08-26 Susan Glenn , Jessi Cisewski-Kehe , Jun Zhu , William M Bement

Word embeddings represent language vocabularies as clouds of $d$-dimensional points. We investigate how information is conveyed by the general shape of these clouds, instead of representing the semantic meaning of each token. Specifically,…

计算与语言 · 计算机科学 2025-01-15 Ondřej Draganov , Steven Skiena

Garside et al. use event history methods to analyze topological data. We provide additional background on persistent homology to contrast the hazard estimators used by Garside et al. with traditional approaches in topological data analysis.…

统计理论 · 数学 2022-05-18 Peter Bubenik

We study detection of collapse in high-dimensional point clouds, where mass concentrates near a lower-dimensional set relative to a non-collapsed geometry. We propose persistent homology-based test statistics under two well-studied…

计算几何 · 计算机科学 2026-04-30 Alexander Kalinowski

We introduce a framework for analyzing topological tipping in time-evolutionary point clouds by extending the recently proposed Topological Optimal Transport (TpOT) distance. While TpOT unifies geometric, homological, and higher-order…

机器学习 · 统计学 2026-03-18 Yixin Wang , Ting Gao , Jinqiao Duan

Exploiting geometric structure to improve the asymptotic complexity of discrete assignment problems is a well-studied subject. In contrast, the practical advantages of using geometry for such problems have not been explored. We implement…

计算几何 · 计算机科学 2016-06-13 Michael Kerber , Dmitriy Morozov , Arnur Nigmetov

Topological data analysis (TDA) is an active field of mathematics for quantifying shape in complex data. Standard methods in TDA such as persistent homology (PH) are typically focused on the analysis of data consisting of a single entity…

Developing reliable methods to discriminate different transient brain states that change over time is a key neuroscientific challenge in brain imaging studies. Topological data analysis (TDA), a novel framework based on algebraic topology,…

神经元与认知 · 定量生物学 2023-12-19 Moo K. Chung , Soumya Das , Hernando Ombao

Hyperuniformity, the suppression of density fluctuations at large length scales, is observed across a wide variety of domains, from cosmology to condensed matter and biological systems. Although the standard definition of hyperuniformity…

统计力学 · 物理学 2024-05-07 Marco Salvalaglio , Dominic J. Skinner , Jörn Dunkel , Axel Voigt

Many datasets can be viewed as a noisy sampling of an underlying space, and tools from topological data analysis can characterize this structure for the purpose of knowledge discovery. One such tool is persistent homology, which provides a…

Features such as photon rings, jets, or hot. spots can leave particular topological signatures in a black hole image. As such, topological data analysis can be used to characterize images resulting from high resolution observations…

高能天体物理现象 · 物理学 2022-10-11 Pierre Christian , Chi-kwan Chan , Anthony Hsu , Feryal Ozel , Dimitrios Psaltis , Iniyan Natarajan

Persistence-based topological optimization deforms a point cloud $X \subset \mathbb{R}^d$ by minimizing objectives of the form $L(X) = \ell(\mathrm{Dgm}(X))$, where $\mathrm{Dgm}(X)$ is a persistence diagram. In practice, optimization is…

计算几何 · 计算机科学 2026-05-13 Abderrahim Bendahi , Alexandre Duplessis , Arnaud Fickinger

Dimension reduction techniques typically seek an embedding of a high-dimensional point cloud into a low-dimensional Euclidean space which optimally preserves the geometry of the input data. Based on expert knowledge, one may instead wish to…

最优化与控制 · 数学 2025-02-28 Ranthony A. Clark , Tom Needham , Thomas Weighill

Computing the state-space topology of a dynamical system from scalar data requires accurate reconstruction of those dynamics and construction of an appropriate simplicial complex from the results. The reconstruction process involves a…

动力系统 · 数学 2016-10-12 Joshua Garland , Elizabeth Bradley , James D. Meiss

Topological Data Analysis (TDA) is a rising field of computational topology in which the topological structure of a data set can be observed by persistent homology. By considering a sequence of sublevel sets, one obtains a filtration that…

统计方法学 · 统计学 2020-03-17 Yu-Min Chung , William Cruse , Austin Lawson

Unsupervised representation learning methods are widely used for gaining insight into high-dimensional, unstructured, or structured data. In some cases, users may have prior topological knowledge about the data, such as a known cluster…

机器学习 · 计算机科学 2023-11-08 Edith Heiter , Robin Vandaele , Tijl De Bie , Yvan Saeys , Jefrey Lijffijt

In real-world, many problems can be formulated as the alignment between two geometric patterns. Previously, a great amount of research focus on the alignment of 2D or 3D patterns, especially in the field of computer vision. Recently, the…

机器学习 · 计算机科学 2018-11-20 Hu Ding , Mingquan Ye