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相关论文: Non-Markovian SIR epidemic spreading model

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We consider a continuous-time Markov chain model of SIR disease dynamics with two levels of mixing. For this so-called stochastic households model, we provide two methods for inferring the model parameters---governing within-household…

种群与进化 · 定量生物学 2018-02-07 James N. Walker , Joshua V. Ross , Andrew J. Black

Most real networks are characterized by connectivity patterns that evolve in time following complex, non-Markovian, dynamics. Here we investigate the impact of this ubiquitous feature by studying the Susceptible-Infected-Recovered (SIR) and…

物理与社会 · 物理学 2016-01-20 Kaiyuan Sun , Andrea Baronchelli , Nicola Perra

The spread of COVID-19 during the initial phase of the first half of 2020 was curtailed to a larger or lesser extent through measures of social distancing imposed by most countries. In this work, we link directly, through machine learning…

种群与进化 · 定量生物学 2020-08-20 G. D. Barmparis , G. P. Tsironis

The dynamics of epidemics depend on how people's behavior changes during an outbreak. At the beginning of the epidemic, people do not know about the virus, then, after the outbreak of epidemics and alarm, they begin to comply with the…

物理与社会 · 物理学 2021-11-29 I. A. Kastalskiy , E. V. Pankratova , E. M. Mirkes , V. B. Kazantsev , A. N. Gorban

In this manuscript, we develop a mobility-based Susceptible-Infectious-Recovered (SIR) model to elucidate the dynamics of pandemic propagation. While traditional SIR models within the field of epidemiology aptly characterize transitions…

动力系统 · 数学 2025-01-16 Ciana Applegate , Jiaxu Li , Dan Han

We study the stochastic susceptible-infected-recovered (SIR) model with time-dependent forcing using analytic techniques which allow us to disentangle the interaction of stochasticity and external forcing. The model is formulated as a…

种群与进化 · 定量生物学 2010-11-23 Andrew J Black , Alan J McKane

The current COVID-19 pandemic and subsequent lockdowns have highlighted the close and delicate relationship between a country's public health and economic health. Macroeconomic models that use preexisting epidemic models to calculate the…

物理与社会 · 物理学 2020-07-01 Erhan Bayraktar , Asaf Cohen , April Nellis

We introduce an epidemic spreading model on a network using concepts from percolation theory. The model is motivated by discussing the standard SIR model, with extensions to describe effects of lockdowns within a population. The underlying…

物理与社会 · 物理学 2020-08-26 Fabrizio Croccolo , H. Eduardo Roman

To reduce the biases of traditional survey-based methods, this paper proposes an epidemic model-based approach to inference the incubation period distribution of COVID-19 utilizing the publicly reported confirmed case number. We construct…

种群与进化 · 定量生物学 2020-07-23 Shiyang Lai , Tianqi Zhao , Ningyuan Fan

The COVID-19 pandemic has been characterised by multiple waves of transmission driven by interventions and emerging variants, challenging epidemic models that assume gradually evolving transmission dynamics. We propose a class of…

应用统计 · 统计学 2026-05-05 Patrick Aschermayr , Konstantinos Kalogeropoulos , Nikolaos Demiris

The study of social networks, and in particular the spread of disease on networks, has attracted considerable recent attention in the physics community. In this paper, we show that a large class of standard epidemiological models, the…

统计力学 · 物理学 2009-11-07 M. E. J. Newman

We are currently facing a highly critical case of a world-wide pandemic. The novel coronavirus (SARS-CoV-2, a.k.a. COVID-19) has proved to be extremely contagious and the original outbreak from Asia has now spread to all continents. This…

物理与社会 · 物理学 2020-06-26 Priyanka , Vicky Verma

We propose an epidemiological model using an adaptive dynamic three compartment (with four states) SIR(D) model. Our approach is similar to non-parametric curve fitting in spirit and automatically adapts to key external factors, such as…

应用统计 · 统计学 2020-09-14 Madhuchhanda Bhattacharjee , Arup Bose

In the present article we introduce an epidemiological model for the investigation of the spread of epidemics caused by viruses. The model is applied specifically to COVID-19, the disease caused by the SARS-Cov-2 virus (aka "novel…

种群与进化 · 定量生物学 2020-04-10 Rodrigo A. Schulz , Carlos H. Coimbra-Araújo , Samuel W. S. Costiche

We present modeling of the COVID-19 epidemic in Illinois, USA, capturing the implementation of a Stay-at-Home order and scenarios for its eventual release. We use a non-Markovian age-of-infection model that is capable of handling long and…

种群与进化 · 定量生物学 2020-11-25 George N. Wong , Zachary J. Weiner , Alexei V. Tkachenko , Ahmed Elbanna , Sergei Maslov , Nigel Goldenfeld

In a previous article [1] we have described the temporal evolution of the Sars- Cov-2 in Italy in the time window February 24-April 1. As we can see in [1] a generalized logistic equation captures both the peaks of the total infected and…

种群与进化 · 定量生物学 2020-08-26 Gabriele Martelloni , Gianluca Martelloni

Aim of this manuscript is to show a simple method to infer the time-course of new COVID-19 infections (the most important information in order to establish the effect of containment strategies) from available aggregated data, such as number…

种群与进化 · 定量生物学 2020-04-21 Andrea Pugliese , Sara Sottile

Fractional-order SIR models have become increasingly popular in the literature in recent years, however unlike the standard SIR model, they often lack a derivation from an underlying stochastic process. Here we derive a fractional-order…

种群与进化 · 定量生物学 2016-03-31 Christopher N Angstmann , Bruce I Henry , Anna V McGann

The stochastic SIRS model is a continuous-time Markov chain modelling the spread of infectious diseases with temporary immunity, in a homogeneously-mixing population of fixed size $N$. We study the scaling behaviour of the extinction time…

概率论 · 数学 2021-01-14 Jingran Zhai

As of November 2020, the number of COVID-19 cases is increasing rapidly in many countries. In Europe, the virus spread slowed considerably in the late spring due to strict lockdown, but a second wave of the pandemic grew throughout the…

定量方法 · 定量生物学 2020-11-25 Kristoffer Rypdal , Filippo Maria Bianchi , Martin Rypdal