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Probabilistic clustering models (or equivalently, mixture models) are basic building blocks in countless statistical models and involve latent random variables over discrete spaces. For these models, posterior inference methods can be…

机器学习 · 统计学 2020-06-24 Ari Pakman , Yueqi Wang , Catalin Mitelut , JinHyung Lee , Liam Paninski

Clustering large datasets is a fundamental problem with a number of applications in machine learning. Data is often collected on different sites and clustering needs to be performed in a distributed manner with low communication. We would…

数据结构与算法 · 计算机科学 2017-02-02 Jiecao Chen , He Sun , David P. Woodruff , Qin Zhang

Improving the future of healthcare starts by better understanding the current actual practices in hospital settings. This motivates the objective of discovering typical care pathways from patient data. Revealing typical care pathways can be…

机器学习 · 计算机科学 2024-12-20 Thomas Guyet , Pierre Pinson , Enoal Gesny

Toxicity evaluation of chemical compounds has traditionally relied on animal experiments;however, the demand for non-animal-based prediction methods for toxicology of compounds is increasing worldwide. Our aim was to provide a…

应用统计 · 统计学 2023-02-06 Jun-ichi Takeshita , Akinobu Toyoda , Hidenori Tani , Yasunori Endo , Sadaaki Miyamoto

We study the large sample behavior of a convex clustering framework, which minimizes the sample within cluster sum of squares under an~$\ell_1$ fusion constraint on the cluster centroids. This recently proposed approach has been gaining in…

统计方法学 · 统计学 2016-12-30 Peter Radchenko , Gourab Mukherjee

Multivariate circular observations, i.e. points on a torus are nowadays very common. Multivariate wrapped models are often appropriate to describe data points scattered on p-dimensional torus. However, statistical inference based on this…

统计计算 · 统计学 2018-11-16 Anahita Nodehi , Mousa Golalizadeh , Mehdi Maadooliat , Claudio Agostinelli

We describe a robust, fast, and memory-efficient procedure that can cluster millions of structures derived from molecular dynamics simulations. The essence of the method is based on a peak-picking algorithm applied to three- and…

生物大分子 · 定量生物学 2015-12-15 Athanasios S. Baltzis , Panagiotis I. Koukos , Nicholas M. Glykos

We consider the problem of clustering a set of high-dimensional data points into sets of low-dimensional linear subspaces. The number of subspaces, their dimensions, and their orientations are unknown. We propose a simple and low-complexity…

信息论 · 计算机科学 2013-03-18 Reinhard Heckel , Helmut Bölcskei

Cluster analysis methods are used to identify homogeneous subgroups in a data set. In biomedical applications, one frequently applies cluster analysis in order to identify biologically interesting subgroups. In particular, one may wish to…

统计方法学 · 统计学 2016-09-23 Sheila Gaynor , Eric Bair

The structure of nanoclusters is complex to describe due to their noncrystallinity, even though bonding and packing constraints limit the local atomic arrangements to only a few types. A computational scheme is presented to extract…

材料科学 · 物理学 2009-11-13 Zhu Yang , Lei-Han Tang

Observational studies of cluster evolution over moderate redshift ranges (to z ~ 1) are a powerful tool for constraining cosmological parameters, yet a comprehensive knowledge of the properties of these clusters has been hitherto…

天体物理学 · 物理学 2007-05-23 Amalia Hicks , Erica Ellingson , Mark Bautz , Howard Yee , Mike Gladders , Gordon Garmire

Traditional clustering methods are limited when dealing with huge and heterogeneous groups of gene expression data, which motivates the development of bi-clustering methods. Bi-clustering methods are used to mine bi-clusters whose subsets…

计算机视觉与模式识别 · 计算机科学 2020-05-13 Kaijie Xu , Witold Pedrycz , Zhiwu Li , Yinghui Quan , Weike Nie

This contribution focuses on the fascinating RNA molecule, its sequence-dependent folding driven by base-pairing interactions, the interplay between these interactions and natural evolution, and its multiple regulatory roles. The four of us…

统计力学 · 物理学 2022-07-28 Simona Cocco , Andrea De Martino , Andrea Pagnani , Martin Weigt

Vertex cover is one of the classical NP-complete problems in theoretical computer science. A vertex cover of a graph is a subset of vertices such that for each edge at least one of the two endpoints is contained in the subset. When studied…

无序系统与神经网络 · 物理学 2007-05-23 Wolfgang Barthel , Alexander K. Hartmann

The task of clustering a set of objects based on multiple sources of data arises in several modern applications. We propose an integrative statistical model that permits a separate clustering of the objects for each data source. These…

机器学习 · 统计学 2015-12-01 Eric F. Lock , David B. Dunson

Convex clustering has recently garnered increasing interest due to its attractive theoretical and computational properties, but its merits become limited in the face of high-dimensional data. In such settings, pairwise affinity terms that…

统计方法学 · 统计学 2021-04-02 Saptarshi Chakraborty , Jason Xu

RNA secondary structure prediction and classification are two important problems in the field of RNA biology. Here, we propose a new permutation based approach to create logical non-disjoint clusters of different secondary structures of a…

生物大分子 · 定量生物学 2014-03-24 Nilay Chheda , Manish K Gupta

We begin by reviewing some probabilistic results about the Dirichlet Process and its close relatives, focussing on their implications for statistical modelling and analysis. We then introduce a class of simple mixture models in which…

统计方法学 · 统计学 2010-03-23 Peter J. Green

Clustering face images according to their identity has two important applications: (i) grouping a collection of face images when no external labels are associated with images, and (ii) indexing for efficient large scale face retrieval. The…

计算机视觉与模式识别 · 计算机科学 2018-07-30 Yichun Shi , Charles Otto , Anil K. Jain

In machine learning it is common to interpret each data point as a vector in Euclidean space. However the data may actually be functional i.e.\ each data point is a function of some variable such as time and the function is discretely…

计算机视觉与模式识别 · 计算机科学 2017-04-14 Stephen Tierney , Junbin Gao , Yi Guo , Zheng Zhang