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相关论文: Accurate numerical simulation of electrodiffusion …

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Ionic electrodiffusion and osmotic water flow are central processes in many physiological systems. We formulate a system of partial differential equations that governs ion movement and water flow in biological tissue. A salient feature of…

组织与器官 · 定量生物学 2014-10-31 Yoichiro Mori

We introduce a model for ionic electrodiffusion and osmotic water flow through cells and tissues. The model consists of a system of partial differential equations for ionic concentration and fluid flow with interface conditions at deforming…

细胞行为 · 定量生物学 2017-08-23 Yoichiro Mori , Chun Liu , Robert S. Eisenberg

Excitable tissue is fundamental to brain function, yet its study is complicated by extreme morphological complexity and the physiological processes governing its dynamics. Consequently, detailed computational modeling of this tissue…

The activity and dynamics of excitable cells are fundamentally regulated and moderated by extracellular and intracellular ion concentrations and their electric potentials. The increasing availability of dense reconstructions of excitable…

数值分析 · 数学 2024-03-08 Pietro Benedusi , Ada J. Ellingsrud , Halvor Herlyng , Marie E. Rognes

Cortical spreading depression and spreading depolarization (CSD) are waves of neuronal depolarization that spread across the cortex, leading to a temporary saturation of brain activity. They are associated to various brain disorders such as…

动力系统 · 数学 2023-06-16 David Reyner-Parra , Carles Bonet , Teresa M. Seara , Gemma Huguet

Modeling and simulating how oxygen supply shapes neuronal excitability is crucial for advancing the understanding of brain function in pathological scenarios, such as ischemia. This condition is caused by a reduced blood supply, leading to…

Complex fluids flow in complex ways in complex structures. Transport of water and various organic and inorganic molecules in the central nervous system are important in a wide range of biological and medical processes [C. Nicholson, and S.…

生物物理 · 物理学 2021-05-19 Yi Zhu , Shixin Xu , Robert S. Eisenberg , Huaxiong Huang

Ionic liquid ion sources are a promising technology that can be used for many applications from space propulsion to focused ion beam microetching. Ionic liquid ion sources produce ion beams by extracting single ions and metastable solvated…

化学物理 · 物理学 2021-11-17 Madeleine Schroeder

We study numerical methods for dissipative particle dynamics (DPD), which is a system of stochastic differential equations and a popular stochastic momentum-conserving thermostat for simulating complex hydrodynamic behavior at mesoscales.…

数值分析 · 数学 2021-06-08 Xiaocheng Shang

Diffusion models are important in tissue engineering as they enable an understanding of molecular delivery to cells in tissue constructs. As three-dimensional (3D) tissue constructs become larger, more intricate, and more clinically…

组织与器官 · 定量生物学 2015-12-22 Richard J. McMurtrey

The movement of ionic solutions is an essential part of biology and technology. Fluidics, from nano- to micro- to microfluidics, is a burgeoning area of technology which is all about the movement of ionic solutions, on various scales. Many…

定量方法 · 定量生物学 2018-06-08 Shixin Xu , Bob Eisenberg , Zilong Song , Huaxiong Huang

Cortical spreading depression (CSD) is a slow-moving ionic and metabolic disturbance that propagates in cortical brain tissue. In addition to massive cellular depolarization, CSD also involves significant changes in perfusion and metabolism…

神经元与认知 · 定量生物学 2020-06-05 Joshua C. Chang , K. C. Brennan , Dongdong He , Huaxiong Huang , Robert M. Miura , Phillip L. Wilson , Jonathan J. Wylie

In the frame of collective dynamics in water, models built on elementary excitations and long-range electromagnetic interactions in the cell and bulk liquid are presented. Making use of the low effective mass of water coherence domains…

生物物理 · 物理学 2008-12-12 Eugen A. Preoteasa , Marian V. Apostol

We establish a high-resolution, high-performance, and high-confidence compressible multiphysics system in a Cartesian grid with irregular boundary topologies to simulate intensive blast waves propagating in large-scale and extremely complex…

计算物理 · 物理学 2024-11-06 Minsheng Huang , Pan Wang , Chengbao Yao , Lidong Cheng , Wenjun Ying

This paper presents a rigorous mathematical analysis, alongside simulation studies, of a spatially extended stochastic electrophysiology model, the Hodgkin-Huxley model of the squid giant axon being a classical example. Although most…

概率论 · 数学 2025-02-05 Wai-Tong Louis Fan , Joshua A. McGinnis , Yoichiro Mori

We propose a numerical method to simulate electrohydrodynamic phenomena in charged colloidal dispersions. This method enables us to compute the time evolutions of colloidal particles, ions, and host fluids simultaneously by solving Newton,…

软凝聚态物质 · 物理学 2007-05-23 Kang Kim , Yasuya Nakayama , Ryoichi Yamamoto

The behaviour of a system of ion channels formed across the cell membrane is presented. The infinite number of channels with an infinite coupling is introduced first as a reference point for the detailed derivation of the…

生物物理 · 物理学 2007-05-23 Adam Rycerz

Electrical neural signalling typically takes place at the time-scale of milliseconds, and is typically modeled using the cable equation. This is a good approximation for processes when ionic concentrations vary little during the time course…

细胞行为 · 定量生物学 2014-03-05 Geir Halnes , Ivar Østby , Klas H. Pettersen , Stig W. Omholt , Gaute T. Einevoll

Computational Fluid Dynamics (CFD) simulations are used for many air flow simulations including road vehicle aerodynamics. Numerical diffusion occurs when local flow direction is not aligned with the mesh lines and when there is a non-zero…

流体动力学 · 物理学 2025-12-29 Alok Warey , Taeyoung Han , Shailendra Kaushik

Drift-diffusion models that account for the motion of both electronic and ionic charges are important tools for explaining the hysteretic behaviour and guiding the development of metal halide perovskite solar cells. Furnishing numerical…

应用物理 · 物理学 2018-07-04 N. E. Courtier , G. Richardson , J. M. Foster
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