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The coupled-channel theory is a natural way of treating nonelastic channels, in particular those arising from collective excitations characterized by nuclear deformations. A proper treatment of such excitations is often essential to the…

核理论 · 物理学 2015-03-13 G. P. A. Nobre , A. Palumbo , F. S. Dietrich , M. Herman , D. Brown , S. Hoblit

The function of protein, RNA, and DNA is modulated by fast, dynamic exchanges between three-dimensional conformations. Conformational sampling of biomolecules with exact and nullspace inverse kinematics, using rotatable bonds as revolute…

机器人学 · 计算机科学 2016-07-27 Rasmus Fonseca , Dominik Budday , Henry van den Bedem

We investigate the properties of the blackbody spectrum by direct numerical solution of the classical equations of motion of a one-dimensional model that contains the essential general features of the field-matter interaction. Our results,…

统计力学 · 物理学 2022-04-04 Jiao Wang , Giulio Casati , Giuliano Benenti

We present a bottom-up approach to the question of supersymmetry breaking in the MSSM. Starting with the experimentally measurable low energy supersymmetry breaking parameters which can take any values consistent with present experimental…

高能物理 - 唯象学 · 物理学 2007-05-23 M. Olechowski

We develop a kinetic reaction model for cells having irradiated DNA molecules due to ionizing radiation exposure. Our theory simultaneously accounts for the time-dependent reactions of the DNA damage, the DNA mutation, the DNA repair, and…

生物物理 · 物理学 2015-06-18 Yuichiro Manabe , Issei Nakamura , Masako Bando

We show that Brownian motion of a one-dimensional domain wall in a large but finite system yields a $\omega^{-3/2}$ power spectrum. This is successfully applied to the totally asymmetric simple exclusion process (TASEP) with open…

统计力学 · 物理学 2009-11-10 Shinji Takesue , Hisao Hayakawa , Tetsuya Mitsudo

We study the problem of passive imaging through convolutive channels. A scene is illuminated with an unknown, unstructured source, and the measured response is the convolution of this source with multiple channel responses, each of which is…

信息论 · 计算机科学 2017-08-25 Kiryung Lee , Felix Krahmer , Justin Romberg

In reaction-diffusion models of annihilation reactions in low dimensions, single-particle dynamics provides a bottleneck for reactions, leading to an anomalously slow approach to the empty state. Here, we construct a reaction model with a…

统计力学 · 物理学 2024-09-26 Enrique Rozas Garcia , Alfred Weddig Karlsson , Johannes Hofmann

As a rule, the shock compression controls the spectrum of diffusively accelerated particles. We argue that this is not so if the backreaction of these particles on the shock structure is significant. We present a self-similar solution in…

天体物理学 · 物理学 2009-10-30 M. A. Malkov

We numerically study stochastic resonance in the unzipping of a model double-stranded DNA by a periodic force. We observe multiple peaks in stochastic resonance in the output signal as the driving force frequency is varied for different…

软凝聚态物质 · 物理学 2023-08-22 Ramu Kumar Yadav , M. Suman Kalyan , Rajeev Kapri , Abhishek Chaudhuri

Phenotype-based screening has attracted much attention for identifying cell-active compounds. Transcriptional and proteomic profiles of cell population or single cells are informative phenotypic measures of cellular responses to…

定量方法 · 定量生物学 2023-11-20 Wei Huang , Aichun Zhu , Hui Liu

Random unimodular lattice triangulations have been recently used as an embedded random graph model, which exhibit a crossover behaviour between an ordered, large-world and a disordered, small-world behaviour. Using the ergodic Pachner flips…

无序系统与神经网络 · 物理学 2016-06-22 Benedikt Krüger , Ella M. Schmidt , Klaus Mecke

A review of the mechanisms of speciation is performed. The mechanisms of the evolution of species, taking into account the feedback of the state of the environment and mechanisms of the emergence of complexity, are considered. It is shown…

种群与进化 · 定量生物学 2018-07-18 Alexey V. Melkikh , Alexey V. Melkikh , Andrei Khrennikov

We study a $\mathcal PT$-symmetric scalar Euclidean field theory with a complex action, using both theoretical analysis and lattice simulations. This model has a rich phase structure that exhibits pattern formation in the critical region.…

高能物理 - 格点 · 物理学 2021-02-02 Moses A. Schindler , Stella T. Schindler , Leandro Medina , Michael C. Ogilvie

General positivity constraints linking various powers of observables in energy eigenstates can be used to sharply locate acceptable regions for the energy eigenvalues, provided that efficient recursive methods are available to calculate the…

高能物理 - 理论 · 物理学 2023-12-22 Zane Ozzello , Yannick Meurice

We propose to use molecular picocavity ensembles as macroscopic coherent nonlinear optical devices enabled by nanoscale strong coupling. For a generic picocavity model that includes molecular and photonic disorder, we derive theoretical…

介观与纳米尺度物理 · 物理学 2022-03-18 Felipe Herrera , Marina Litinskaya

Feedback in cellular processes is typically inferred through cellular responses to experimental perturbations. Modular response analysis provides a theoretical framework for translating specific perturbations into feedback sensitivities…

分子网络 · 定量生物学 2025-05-09 Seshu Iyengar , Andreas Hilfinger

We study the features on the unzipping process of a modified version of the Peyrard-Bishop- Dauxois model. We show that the inclusion of a barrier in the on-site potential allows for the existence of stable domain wall solutions between…

生物物理 · 物理学 2013-12-12 A. E. Bergues-Pupo , J. M. Bergues , F. Falo

Modern functional materials consist of large molecular building blocks with significant chemical complexity which limits spectroscopic property prediction with accurate first-principles methods. Consequently, a targeted design of materials…

化学物理 · 物理学 2021-07-14 Julia Westermayr , Reinhard J. Maurer

Angle encoding has emerged as a popular feature map for embedding classical data into quantum models, naturally generating truncated Fourier series with universal function approximation capabilities. Despite this expressive capability,…