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This chapter aims at emphasizing the crucial role of partial reactivity of a catalytic surface or a target molecule in diffusion-controlled reactions. We discuss various microscopic mechanisms that lead to imperfect reactions, the Robin…

化学物理 · 物理学 2019-11-05 Denis S. Grebenkov

We revise the encounter-based approach to imperfect diffusion-controlled reactions, which employs the statistics of encounters between a diffusing particle and the reactive region to implement surface reactions. We extend this approach to…

统计力学 · 物理学 2023-10-03 Denis S. Grebenkov

Diffusion-mediated surface phenomena are crucial for human life and industry, with examples ranging from oxygen capture by lung alveolar surface to heterogeneous catalysis, gene regulation, membrane permeation and filtration processes.…

统计力学 · 物理学 2020-08-19 Denis S. Grebenkov

We develop a theory of reversible diffusion-controlled reactions with generalized binding/unbinding kinetics. In this framework, a diffusing particle can bind to the reactive substrate after a random number of arrivals onto it, with a given…

化学物理 · 物理学 2023-10-03 Denis S. Grebenkov

We consider steady-state diffusion in a bounded planar domain with multiple small targets on a smooth boundary. Using the method of matched asymptotic expansions, we investigate the competition of these targets for a diffusing particle and…

偏微分方程分析 · 数学 2025-11-18 Denis S. Grebenkov , Michael J. Ward

This paper deals with the homogenization of the reaction-diffusion equations in a domain containing periodically distributed holes of size $\varepsilon$, with a dynamical boundary condition of reactive-diffusive type, i.e., we consider the…

偏微分方程分析 · 数学 2025-12-18 María Anguiano

We develop an encounter-based approach for describing restricted diffusion with a gradient drift towards a partially reactive boundary. For this purpose, we introduce an extension of the Dirichlet-to-Neumann operator and use its eigenbasis…

化学物理 · 物理学 2022-10-10 Denis S. Grebenkov

Kinetics of model catalytic processes proceeding on inhomogeneous surfaces is studied. We employ an extended mean-field model that takes into account surface inhomogeneities. The influence of surface diffusion of adsorbent on the kinetics…

材料科学 · 物理学 2009-11-13 Lukasz Cwiklik

The radiation (reaction, Robin) boundary condition for the continuum diffusion equation is widely used in chemical and biological applications to express reactive boundaries. The underlying trajectories of the diffusing particles are…

数学物理 · 物理学 2007-09-02 A. Singer , Z. Schuss , D. Holcman

We introduce a simple model of heterogeneous catalysis on a disordered surface which consists of two types of randomly distributed sites with different adsorption rates. Disorder can create a reactive steady state in situations where the…

凝聚态物理 · 物理学 2009-10-28 L. Frachebourg , P. L. Krapivsky , S. Redner

We study diffusion of particles on the surface of a sphere toward a partially reactive circular target with partly reversible binding kinetics. We solve the coupled diffusion-reaction equations and obtain the exact expressions for the…

统计力学 · 物理学 2019-11-05 Denis S. Grebenkov

Chemical reactions involving diffusion of reactants and subsequent chemical fixation steps are generally termed "diffusion-influenced" (DI). Virtually all biochemical processes in living media can be counted among them, together with those…

化学物理 · 物理学 2016-06-29 Marta Galanti , Duccio Fanelli , Francesco Piazza

Many processes in cell biology involve diffusion in a domain $\Omega$ that contains a target $\calU$ whose boundary $\partial \calU$ is a chemically reactive surface. Such a target could represent a single reactive molecule, an…

统计力学 · 物理学 2022-01-06 Paul C. Bressloff

Many cellular and subcellular biological processes can be described in terms of diffusing and chemically reacting species (e.g. enzymes). Such reaction-diffusion processes can be mathematically modelled using either deterministic…

生物物理 · 物理学 2015-06-26 Radek Erban , S. Jonathan Chapman

A probabilistic framework for studying single-particle diffusion in partially absorbing media has recently been developed in terms of an encounter-based approach. The latter computes the joint probability density (generalized propagator)…

统计力学 · 物理学 2022-10-12 Paul C Bressloff

The use of fully or partially absorbing boundary conditions for diffusion-based problems has become paradigmatic in physical chemistry and biochemistry to describe reactions occurring in solutions or in living media. However, as chemical…

统计力学 · 物理学 2022-12-13 Francesco Piazza

Consider a finite system of diffusing particles coupled through a reactive boundary. Each particle is reflected, but may react with the boundary according to a killing mechanism which depends on the current reactivity of the boundary and…

概率论 · 数学 2026-05-20 Eliana Fausti , Andreas Sojmark

Every mathematical model describing physical phenomena is an approximation to model reality, hence has its limitations. Depending on characteristic values of the variables in the model, different aspects of the model and, e.g.,…

偏微分方程分析 · 数学 2019-12-02 Björn Augner , Dieter Bothe

This is the first part of our study of inertial manifolds for the system of 1D reaction-diffusion-advection equations which is devoted to the case of Dirichlet or Neumann boundary conditions. Although this problem does not initially possess…

偏微分方程分析 · 数学 2017-03-02 Anna Kostianko , Sergey Zelik

Let \begin{equation*} L=\sum_{i,j=1}^da_{i,j}\frac{\partial^2}{\partial x_i\partial x_j}-\sum_{i=1}^db_i\frac{\partial}{\partial x_i} \end{equation*} be a second order elliptic operator and consider the reaction-diffusion equation with…

偏微分方程分析 · 数学 2014-02-20 Ross G. Pinsky
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