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There is significant interest in modelling the mechanics and physics of growth of soft biological systems such as tumors and bacterial biofilms. Solid tumors account for more than 85% of cancer mortality and bacterial biofilms account for a…

软凝聚态物质 · 物理学 2024-03-29 Chockalingam Senthilnathan , Tal Cohen

We consider a class of models for nonlinearly elastic surfaces in this work. We have in mind thin, highly deformable structures modeled directly as two-dimensional nonlinearly elastic continua, accounting for finite membrane and bending…

偏微分方程分析 · 数学 2021-05-17 Timothy J. Healey

Cell invasion and spatial pattern formation are two distinct manifestations of cellular self-organisation in development, regeneration, and disease. Here, we develop and analyse a unified theoretical framework that links these two seemingly…

组织与器官 · 定量生物学 2026-04-30 Carles Falcó , Samuel W. S. Johnson , Mohit P. Dalwadi , Philip K. Maini

We develop a new method for proving hypocoercivity for a large class of linear kinetic equations with only one conservation law. Local mass conservation is assumed at the level of the collision kernel, while transport involves a confining…

偏微分方程分析 · 数学 2010-05-11 Jean Dolbeault , Clément Mouhot , Christian Schmeiser

In this survey article, a variety of systems modeling tumor growth are discussed. In accordance with the hallmarks of cancer, the described models incorporate the primary characteristics of cancer evolution. Specifically, we focus on…

动力系统 · 数学 2023-03-21 Marvin Fritz

Theoretical and computational tools that can be used in the clinic to predict neoplastic progression and propose individualized optimal treatment strategies to control cancer growth is desired. To develop such a predictive model, one must…

细胞行为 · 定量生物学 2015-05-20 Salvatore Torquato

There are numerous scenarios in which populations of cells migrate in crowded environments. Typical examples include wound healing, cancer growth and embryo development. In these crowded environments cells are able to interact with each…

细胞行为 · 定量生物学 2019-07-03 Christian A. Yates , George Chappelle

The paper introduces a PDE model for the growth of a tree stem or a vine. The equations describe the elongation due to cell growth, and the response to gravity and to external obstacles. An additional term accounts for the tendency of a…

最优化与控制 · 数学 2020-11-10 Alberto Bressan , Michele Palladino , Wen Shen

Current mathematical frameworks for predicting the flux state and macromolecular composition of the cell do not rely on thermodynamic constraints to determine the spontaneous direction of reactions. These predictions may be biologically…

最优化与控制 · 数学 2020-08-14 Amir Akbari , Bernhard O. Palsson

The buckling of a soft elastic sample under growth or swelling has highlighted a new interest in materials science, morphogenesis, and biology or physiology. Indeed, the change of mass or volume is a common fact of any living species, and…

软凝聚态物质 · 物理学 2023-09-21 Martine Ben Amar

We investigate the Green function of two-dimensional dense random packings of grains in order to discriminate between the different theories of stress transmission in granular materials. Our computer simulations allow for a detailed…

软凝聚态物质 · 物理学 2009-11-11 N. Gland , P. Wang , Hernan A. Makse

In this review, we discuss the applications of the theory of birth-and-death processes to problems in biology, primarily, those of evolutionary genomics. The mathematical principles of the theory of these processes are briefly described.…

定量方法 · 定量生物学 2007-05-23 Artem S. Novozhilov , Georgy P. Karev , Eugene V. Koonin

We consider a fully practical finite element approximation of a diffuse interface model for tumour growth that takes the form of a degenerate parabolic system. In addition to showing stability bounds for the approximation, we prove…

数值分析 · 数学 2022-02-07 Joe Eyles , Robert Nürnberg , Vanessa Styles

A two-phase model and its application to wavefields numerical simulation are discussed in the context of modeling of compressible fluid flows in elastic porous media. The derivation of the model is based on a theory of thermodynamically…

流体动力学 · 物理学 2020-06-11 Evgeniy Romenski , Galina Reshetova , Ilya Peshkov , Michael Dumbser

A classical problem describing the collective motion of cells, is the movement driven by consumption/depletion of a nutrient. Here we analyze one of the simplest such model written as a coupled Partial Differential Equation/Ordinary…

偏微分方程分析 · 数学 2022-09-02 Pierre-Emmanuel Jabin , Benoît Perthame

We investigate morphologies of proliferating cellular tissue using a newly developed numerical simulation model for mechanical cell division. The model reproduces structures of simple multi-cellular organisms via simple rules for selective…

软凝聚态物质 · 物理学 2018-11-20 Pranav Madhikar , Jan Åström , Björn Baumeier , Mikko Karttunen

We introduce a novel approach of epidemic modeling by combining age-structured models with damped wave equations. This transforms the parabolic-type reaction-diffusion model into a hyperbolic system that shares many properties with a wave…

偏微分方程分析 · 数学 2025-07-28 Nicolas Schlosser

In three space dimensions, we consider the compressible inviscid model describing the time evolution of two fluids sharing the same velocity and enjoying the algebraic pressure closure. By employing the technique of convex integration, we…

偏微分方程分析 · 数学 2019-12-24 Yang Li , Ewelina Zatorska

In this paper, we derive an effective macroscale description suitable to describe the growth of biological tissue within a porous tissue-engineering scaffold. As in our recent work (Holden \textit{et al.} "A multiphase multiscale model for…

组织与器官 · 定量生物学 2019-10-01 E. C. Holden , B. S. Brook , S. J. Chapman , R. D. O'Dea

A packed community of exponentially proliferating microbes will spread in size exponentially. However, due to nutrient depletion, mechanical constraints, or other limitations, exponential proliferation is not indefinite, and the spreading…

生物物理 · 物理学 2026-02-02 Meiyi Yao , Joshua M. Jones , Joseph W. Larkin , Andrew Mugler
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