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The Voronoi-based cellular model is highly successful in describing the motion of two-dimensional confluent cell tissues. In the homogeneous version of this model, the energy of each cell is determined solely by its geometric shape and…

细胞行为 · 定量生物学 2018-11-07 Eial Teomy , David A. Kessler , Herbert Levine

In this work we provide an overview of jamming transitions in two dimensional systems focusing on the limit of frictionless particle interactions in the absence of thermal fluctuations. We first discuss jamming in systems with short range…

软凝聚态物质 · 物理学 2017-12-06 C. Reichhardt , C. J. Olson Reichhardt

Biological cells in soft materials can be modeled as anisotropic force contraction dipoles. The corresponding elastic interaction potentials are long-ranged ($\sim 1/r^3$ with distance $r$) and depend sensitively on elastic constants,…

软凝聚态物质 · 物理学 2009-11-07 U. S. Schwarz , S. A. Safran

In this paper we study the rigorous sharp interface limit of a diffuse interface model related to the dynamics of tumor growth, when a parameter $\epsilon$, representing the interface thickness between the tumorous and non tumorous cells,…

偏微分方程分析 · 数学 2016-12-21 E. Rocca , R. Scala

Motivated by solid-solid phase transitions in elastic thin films, we perform a Gamma-convergence analysis for a singularly perturbed energy describing second order phase transitions in a domain of vanishing thickness. Under a two-wells…

偏微分方程分析 · 数学 2012-02-29 Bernardo Galvão-Sousa , Vincent Millot

Rigidity transitions in simple models of confluent cells have been a powerful organizing principle in understanding the dynamics and mechanics of dense biological tissue. In this work we explore the interplay between geometry and rigidity…

软凝聚态物质 · 物理学 2020-07-08 Daniel M. Sussman

We revisit the sharp-interface continuum thermodynamics of two-phase multicomponent fluid systems with interfacial mass. Since the published work is not fully consistent, we provide a rigorous derivation of the local balance equations and…

流体动力学 · 物理学 2022-08-15 Dieter Bothe

We study a two-dimensional, off-lattice particle model introduced to describe absorbing phase transitions in driven non-Brownian suspensions. We numerically explore the $(\phi,\epsilon)$ phase diagram, where $\phi$ is the packing fraction…

统计力学 · 物理学 2026-03-17 Leonardo Galliano , Ludovic Berthier

A molecular-dynamics type simulation method, which is suitable for investigating the dewetting dynamics of thin and viscous liquid layers, is discussed. The efficiency of the method is exemplified by studying a two-parameter depinning-like…

软凝聚态物质 · 物理学 2015-06-22 Botond Tyukodi , Yves Brechet , Zoltan Neda

We present a sharp-interface model of two-dimensional ramified growth during quasi-steady electrodeposition. Our model differs from previous modeling methods in that it includes the important effects of extended space-charge regions and…

流体动力学 · 物理学 2015-10-14 Christoffer P. Nielsen , Henrik Bruus

The rheology near jamming of a suspension of soft colloidal spheres is studied using a custom microfluidic rheometer that provides stress versus strain rate over many decades. We find non-Newtonian behavior below the jamming concentration…

软凝聚态物质 · 物理学 2010-11-03 K. N. Nordstrom , E. Verneuil , P. E. Arratia , A. Basu , Z. Zhang , A. G. Yodh , J. P. Gollub , D. J. Durian

We provide a novel sharp-interface analysis via Gamma-convergence for a non-local and non-homogeneous diffuse-interface model for phase transitions, featuring an interplay between a non-local interaction kernel and a spatially dependent…

偏微分方程分析 · 数学 2025-04-24 Elisa Davoli , Emanuele Tasso

We probe the onset and effect of contact changes in soft harmonic particle packings which are sheared quasistatically. We find that the first contact changes are the creation or breaking of contacts on a single particle. We characterize the…

We construct gradient structures for free boundary problems with nonlinear elasticity and study the impact of moving contact lines. In this context, we numerically analyze how phase-field models converge to certain sharp-interface limits…

偏微分方程分析 · 数学 2024-06-26 Leonie Schmeller , Dirk Peschka

Cell migration is frequently modelled using on-lattice agent-based models (ABMs) that employ the excluded volume interaction. However, cells are also capable of exhibiting more complex cell-cell interactions, such as adhesion, repulsion,…

细胞行为 · 定量生物学 2023-07-26 Shahzeb Raja Noureen , Jennifer P. Owen , Richard L. Mort , Christian A. Yates

Bounded plasmas are characterized by a rapid but smooth transition from quasi-neutrality in the volume to electron depletion close to the electrodes and chamber walls. The thin non-neutral region, the boundary sheath, comprises only a small…

等离子体物理 · 物理学 2022-05-25 Maximilian Klich , Jan Löwer , Sebastian Wilczek , Thomas Mussenbrock , Ralf Peter Brinkmann

The properties of tissue interfaces -- between separate populations of cells, or between a group of cells and its environment -- has attracted intense theoretical, computational, and experimental study. Recent work on shape-based models…

软凝聚态物质 · 物理学 2024-12-04 Haicen Yue , Charles R. Packard , Daniel M. Sussman

The jamming transition in the stochastic cellular automaton model (Nagel-Schreckenberg model) of highway traffic is analyzed in detail, by studying the relaxation time, a mapping to surface growth problems and the investigation of…

统计力学 · 物理学 2009-10-30 Marton Sasvari , Janos Kertesz

The jamming transition between flow and amorphous-solid states exhibits paradoxical properties characterized by hyperuniformity (suppressed spatial fluctuations) and criticality (hyperfluctuations), whose origin remains unclear. Here we…

软凝聚态物质 · 物理学 2025-06-23 Jin Shang , Yinqiao Wang , Deng Pan , Yuliang Jin , Jie Zhang

How do cells tune emergent properties at the scale of tissues? One class of such emergent behaviors are rigidity transitions, in which a tissue changes from a solid-like to a fluid-like state or vice versa. Here, we introduce a new way for…

软凝聚态物质 · 物理学 2025-06-04 Sadjad Arzash , Indrajit Tah , Andrea J. Liu , M. Lisa Manning