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We present a numerical study on the rheology of semi-dilute and concentrated filament suspensions of different bending stiffness and Reynolds number, with the immersed boundary method used to couple the fluid and solid. The filaments are…

流体动力学 · 物理学 2019-11-13 Arash Alizad Banaei , Marco Edoardo Rosti , Luca Brandt

We present a generalisation of efficient numerical frameworks for modelling fluid-filament interactions via the discretisation of a recently-developed, non-local integral equation formulation to incorporate regularised Stokeslets with…

流体动力学 · 物理学 2019-10-02 Benjamin J. Walker , Kenta Ishimoto , Hermes Gadêlha , Eamonn A. Gaffney

The motion of flexible fibers through structured fluidic environments is ubiquitous in nature and industrial applications. Most often, their dynamics results from the complex interplay between internal elastic stresses, contact forces and…

流体动力学 · 物理学 2022-09-23 Ursy Makanga , Mohammadreza Sepahi , Camille Duprat , Blaise Delmotte

Motivated by diverse phenomena in cellular biophysics, including bacterial flagellar motion and DNA transcription and replication, we study the overdamped nonlinear dynamics of a rotationally forced filament with twist and bend elasticity.…

软凝聚态物质 · 物理学 2009-10-31 Charles W. Wolgemuth , Thomas R. Powers , Raymond E. Goldstein

To initiate tumbling of an E. coli, one of the helical flagella reverses its sense of rotation. It then transforms from its normal form first to the transient semicoiled state and subsequently to the curly-I state. The dynamics of…

生物物理 · 物理学 2016-02-23 Tapan Chandra Adhyapak , Holger Stark

The crystallization of bundles in filament networks interacting via long-range repulsions in confinement is described by a phenomenological model. The model demonstrates the formation of the hexagonal crystalline order via the interplay of…

软凝聚态物质 · 物理学 2013-05-10 Zhenwei Yao , Monica Olvera de la Cruz

We study the buckling of an idealized, semiflexible filament along whose contour magnetic moments are placed. {We give analytic expressions for the critical stiffness of the filament below which it buckles due to the magnetic compression.…

软凝聚态物质 · 物理学 2017-10-10 Horst-Holger Boltz , Stefan Klumpp

We develop the theory of the coupling between in-plane order and out-of-plane geometry in twisted, two-dimensionally ordered filament bundles based on the non-linear continuum elasticity theory of columnar materials. We show that twisted…

软凝聚态物质 · 物理学 2015-06-03 Gregory M. Grason

Exploiting the "natural" frame of space curves, we formulate an intrinsic dynamics of twisted elastic filaments in viscous fluids. A pair of coupled nonlinear equations describing the temporal evolution of the filament's complex curvature…

软凝聚态物质 · 物理学 2009-10-31 Raymond E. Goldstein , Thomas R. Powers , Chris H. Wiggins

The critical buckling characteristics of hydrostatically pressurized complete spherical shells filled with an elastic medium are demonstrated. A model based on small deflection thin shell theory, the equations of which are solved in…

软凝聚态物质 · 物理学 2011-03-14 Motohiro Sato , M. Ahmer Wadee , Kohtaroh Iiboshi , Takafumi Sekizawa , Hiroyuki Shima

Bundles of stiff filaments are ubiquitous in the living world, found both in the cytoskeleton and in the extracellular medium. These bundles are typically held together by smaller cross-linking molecules. We demonstrate analytically,…

Dynamic organization of the cytoskeletal filaments and rod-like proteins in the cell membrane and other biological interfaces occurs in many cellular processes. Previous modeling studies have considered the dynamics of a single rod on fluid…

流体动力学 · 物理学 2022-06-17 Wenzheng Shi , Moslem Moradi , Ehssan Nazockdast

The transport of particles across lipid-bilayer membranes is important for biological cells to exchange information and material with their environment. Large particles often get wrapped by membranes, a process which has been intensively…

软凝聚态物质 · 物理学 2024-06-04 Jiarul Midya , Thorsten Auth , Gerhard Gompper

To mimic the mechanical response of passive biological cilia in complex fluids, we study the bending dynamics of an anchored elastic fiber submitted to a dilute granular suspension under shear. We show that the bending fluctuations of the…

A thin flat rectangular plate supported on its edges and subjected to in-plane loading exhibits stable post-buckling behaviour. However, the introduction of a nonlinear (softening) elastic foundation may cause the response to become…

斑图形成与孤子 · 物理学 2016-03-18 M. Khurram Wadee , David J. B. Lloyd , Andrew P. Bassom

When a colloidal particle adheres to a fluid membrane, it induces elastic deformations in the membrane which oppose its own binding. The structural and energetic aspects of this balance are theoretically studied within the framework of a…

软凝聚态物质 · 物理学 2009-11-10 Markus Deserno

We introduce a phenomenological model to study the properties of bundles of polar filaments which interact via active elements. The stability of the homogeneous state, the attractors of the dynamics in the unstable regime and the tensile…

统计力学 · 物理学 2009-10-31 Karsten Kruse , Frank Julicher

A filament of liquid is usually unstable and breaks up into small droplets, while a filament of polymer solution is known to be quite stable against such instability, and they form a stable configuration of filament connecting two spherical…

软凝聚态物质 · 物理学 2020-08-20 Jiajia Zhou , Masao Doi

We develop a formalism that describes the bending and twisting of axoneme-like filament bundles. We obtain general formulas to determine the relative sliding between any arbitrary filaments in a bundle subjected to unconstrained…

细胞行为 · 定量生物学 2007-05-23 A. Ludu , N. Hutchings

This study systematically investigates the dynamics of the bacterial transition from free-swimming to surface adhesion, a process characterized by both height $h$ and inclination angle $\Psi$. The surface entrapment process is divided into…

软凝聚态物质 · 物理学 2025-06-25 Baopi Liu , Bowen Jin , Ning An