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We have investigated thermodynamic and dynamic properties as well as the dielectric constant of water-metha\-nol model mixtures in the entire range of composition by using constant pressure molecular dynamics simulations at ambient…

软凝聚态物质 · 物理学 2015-12-25 E. Galicia-Andrés , H. Dominguez , L. Pusztai , O. Pizio

Thermodynamics, introduced over two centuries ago, remains foundational to our understanding of physical, chemical, biological, and engineering systems. Its principles are traditionally grounded in the statistical mechanics framework, which…

化学物理 · 物理学 2025-06-30 Małgorzata J. Zimoń , Fausto Martelli

Water is an associated liquid in which the main intermolecular interaction is the hydrogen bond (HB) which is limited to four per atom, independently of the number of neighbours. We have considered a hydrogen bond net superposed on Bernal's…

统计力学 · 物理学 2009-11-07 Nara Guisoni , Vera Bohomoletz Henriques

Dynamic structuring of water is a key player in a large class of processes underlying biochemical and technological developments today, the latter often involving electric fields. However, the anisotropic coupling between the water…

软凝聚态物质 · 物理学 2019-05-29 Andreas Baer , Zoran Miličević , David M. Smith , Ana-Sunčana Smith

The microscopic description of the local structure of water remains an open challenge. Here, we adopt an agnostic approach to understanding water's hydrogen bond network using data harvested from molecular dynamics simulations of an…

软凝聚态物质 · 物理学 2022-04-05 Adu Offei-Danso , Ali Hassanali , Alex Rodriguez

We perform molecular dynamics simulation of water using the TIP5P model to quantify structural order in both the first shell (defined by four nearest neighbors)and second shell (defined by twelve next-nearest neighbors) of a central water…

A recent mode coupling theory of higher-order correlation functions is tested on a simple hard-sphere fluid system at intermediate densities. Multi-point and multi-time correlation functions of the densities of conserved variables are…

统计力学 · 物理学 2009-11-07 Ramses van Zon , Jeremy Schofield

We construct a coarse-grained effective two-dimensional (2d) hydrodynamic theory as a theoretical model for a coupled system of a fluid membrane and a thin layer of a polar active fluid in its ordered state that is anchored to the membrane.…

软凝聚态物质 · 物理学 2012-11-15 Niladri Sarkar , Abhik Basu

Ab initio molecular dynamics simulations of liquid water under equilibrium ambient conditions, together with a novel energy decomposition analysis, have recently shown that a substantial fraction of water molecules exhibit a significant…

无序系统与神经网络 · 物理学 2020-06-24 Hossam Elgabarty , Thomas D. Kühne

We develop a graph-based model of the hydrogen bond network in water, with a view towards quantitatively modeling the molecular-level correlational structure of the network. The networks are formed are studied by the constructing the model…

统计力学 · 物理学 2018-06-19 Rahul Dandekar , Ali A. Hassanali

Hydrogen bonds are a common feature in protein folding and aggregation. Due to their chemical peculiarities in terms of strength and directionality, a particular attention must be paid to the definition of the hydrogen bond potential…

生物大分子 · 定量生物学 2012-08-13 Marta Enciso

The associative interaction, such as hydrogen bonding, can bring about versatile functionalities to polymer systems, which has been investigated by tremendous researches, but the fundamental understanding on association process is still…

软凝聚态物质 · 物理学 2025-01-20 Xiangyu Zhang , Dong Meng

Series of molecular dynamics simulations for 2-propanol-water mixtures, as a function of temperature (between freezing and room temperature) and composition (xip= 0, 0.5, 0.1 and 0.2) have been performed for temperatures reported in the…

化学物理 · 物理学 2019-11-06 Szilvia Pothoczki , László Pusztai , Imre Bakó

The covalent-like characteristics of hydrogen bonds offer a new perspective on intermolecular interactions. Here, using density functional theory and post-Hartree-Fock methods, we reveal that there are two bonding molecular orbitals (MOs)…

原子与分子团簇 · 物理学 2015-07-09 Bo Wang , Wanrun Jiang , Xing Dai , Yang Gao , Zhigang Wang , Rui-Qin Zhang

Extensive molecular dynamics computer simulations have been conducted for ethanol-water liquid mixtures in the water-rich side of the composition range, with 10, 20 and 30 mol % of the alcohol, at temperatures between room temperature and…

化学物理 · 物理学 2019-06-12 Szilvia Pothoczki , László Pusztai , Imre Bakó

We have investigated the effects of either distorting hydrogen bonds or removing proton degeneracy on the thermodynamic properties of a minimal model for associating liquids. The presence of two liquid phases and a density anomaly is…

软凝聚态物质 · 物理学 2007-05-23 Aline Balladares , Vera B. Henriques , Marcia C. Barbosa

The hydrogen-bond network of water is characterized by the presence of coordination defects relative to the ideal tetrahedral network of ice, whose fluctuations determine the static and time-dependent properties of the liquid. Because of…

化学物理 · 物理学 2016-06-06 Piero Gasparotto , Ali A. Hassanali , Michele Ceriotti

Quantitative prediction of thermodynamic properties in solution is essential for translating atomistic simulations into reliable chemical insight. As an exemplar system, the behaviour of CaCO$_3$ in water has been widely studied to…

New X-ray and neutron diffraction experiments have been performed on ethanol-water mixtures as a function of decreasing temperature, so that such diffraction data are now available over the entire composition range. Extensive molecular…

软凝聚态物质 · 物理学 2021-08-05 Szilvia Pothoczki , Ildikó Pethes , László Pusztai , László Temleitner , Koji Ohara , Imre Bakó

The microscopic behavior of water under different conditions and in different environments remains the subject of intense debate. A great number of the controversies arise due to the contradictory predictions obtained within different…

化学物理 · 物理学 2012-10-29 Gregory R. Medders , Volodymyr Babin , Francesco Paesani