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We study reaction-diffusion waves on curved two-dimensional surfaces, and determine the influence of curvature upon the nucleation and propagation of spatially localized waves in an excitable medium modelled by the generic FitzHugh-Nagumo…

斑图形成与孤子 · 物理学 2014-08-13 Frederike Kneer , Eckehard Schöll , Markus A. Dahlem

Motivated by recent experiments on intracellular calcium dynamics, we study the general issue of fluctuation-induced nucleation of waves in excitable media. We utilize a stochastic Fitzhugh-Nagumo model for this study, a spatially-extended…

凝聚态物理 · 物理学 2009-11-10 Herve Henry , Herbert Levine

Many multicellular communities propagate signals in a directed manner via excitable waves. Cell-to-cell heterogeneity is a ubiquitous feature of multicellular communities, but the effects of heterogeneity on wave propagation are still…

生物物理 · 物理学 2020-04-22 Xiaoling Zhai , Joseph W. Larkin , Gürol M. Süel , Andrew Mugler

The Fitzhugh-Nagumo equations have been used as a caricature of the Hodgkin-Huxley equations of neuron firing to better understand the essential dynamics of the interaction of the membrane potential and the restoring force and to capture,…

神经元与认知 · 定量生物学 2007-05-23 F. Berezovskaya , E. Camacho , S. Wirkus , G. Karev

Living cells employ excitable reaction-diffusion waves for internal cellular functions, in which curvature-inducing proteins are often involved. However, the role of their mechanochemical coupling is not well understood. Here, we report the…

软凝聚态物质 · 物理学 2022-08-09 Naoki Tamemoto , Hiroshi Noguchi

We consider the lateral diffusion of a protein interacting with the curvature of the membrane. The interaction energy is minimized if the particle is at a membrane position with a certain curvature that agrees with the spontaneous curvature…

软凝聚态物质 · 物理学 2008-12-10 Stefan M. Leitenberger , Ellen Reister-Gottfried , Udo Seifert

The calcium transport in biological systems is modelled as a reaction-diffusion process. Nonlinear calcium waves are then simulated using a stochastic cellular automaton whose rules are derived from the corresponding coupled partial…

斑图形成与孤子 · 物理学 2010-03-30 Xin-She Yang

In embryogenesis, epithelial cells, acting as individual entities or as coordinated aggregates in a tissue, exhibit strong coupling between chemical signalling and mechanical responses to internally or externally applied stresses.…

组织与器官 · 定量生物学 2023-06-27 Katerina Kaouri , Paul E. Méndez , Ricardo Ruiz-Baier

Changes in calcium concentration along the sperm flagellum regulate sperm motility and hyperactivation, characterized by an increased flagellar bend amplitude and beat asymmetry, enabling the sperm to reach and penetrate the ovum (egg). The…

数值分析 · 数学 2019-10-21 Lucia Carichino , Sarah D. Olson

Linearization around unstable travelling waves in excitable systems can be used to approximate strength-extent curves in the problem of initiation of excitation waves for a family of spatially confined perturbations to the rest state. This…

斑图形成与孤子 · 物理学 2020-04-08 Christopher D. Marcotte , Vadim N. Biktashev

Since Noble adapted in 1962 the model of Hodgkin and Huxley to fit Purkinje fibres the refinement of models for cardiomyocytes has continued. Most of these models are high-dimensional systems of coupled equations so that the possible…

Reaction-diffusion waves in multiple spatial dimensions advance at a rate that strongly depends on the curvature of the wave fronts. These waves have important applications in many physical, ecological, and biological systems. In this work,…

斑图形成与孤子 · 物理学 2022-12-28 Pascal R. Buenzli , Matthew J. Simpson

Fifty years ago, Fitzugh introduced a phase portrait that became famous for a twofold reason: it captured in a physiological way the qualitative behavior of Hodgkin-Huxley model and it revealed the power of simple dynamical models to unfold…

动力系统 · 数学 2011-12-13 Alessio Franci , Guillaume Drion , Vincent Seutin , Rodolphe Sepulchre

The FitzHugh-Nagumo equation, originally conceived in neuroscience during the 1960s, became a key model providing a simplified view of excitable neuron cell behavior. Its applicability, however, extends beyond neuroscience into fields like…

斑图形成与孤子 · 物理学 2025-01-08 Daniel Cebrián-Lacasa , Pedro Parra-Rivas , Daniel Ruiz-Reynés , Lendert Gelens

We propose a simple discrete stochastic model for calcium dynamics in living cells. Specifically, the calcium concentration distribution is assumed to give rise to a set of probabilities for the opening/closing of channels which release…

patt-sol · 物理学 2009-10-31 Markus Baer , Martin Falcke , Herbert Levine , Lev S. Tsimring

For biologically relevant macromolecules such as intrinsically disordered proteins, internal degrees of freedom that allow for shape changes have a large influence on both the motion and function of the compound. A detailed understanding of…

In order to adequately describe molecular rotation far from equilibrium, we have generalized the J-diffusion model by allowing the rotational relaxation rate to be angular momentum dependent. The calculated nonequilibrium rotational…

软凝聚态物质 · 物理学 2008-01-24 M. F. Gelin , D. S. Kosov

In standard models of cardiac electrophysiology, including the bidomain and monodomain models, local perturbations can propagate at infinite speed. We address this unrealistic property by developing a hyperbolic bidomain model that is based…

数值分析 · 数学 2017-10-11 Simone Rossi , Boyce E. Griffith

We study a system of differential equation simulating transport phenomena in active structured media. The model is a generalization of the McKean s modification of the celebrated FitzHugh--Nagumo system, describing the nerve impulse…

数学物理 · 物理学 2015-06-11 Wojciech Likus , Vsevolod A. Vladimirov

A commonly accepted feature of an excitable medium is that a local excitation leads to a propagation of circular or spiral excitation wave-fronts. This is indeed the case in fully excitable medium. However, with a decrease of an…

新兴技术 · 计算机科学 2019-04-16 Andrew Adamatzky
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