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A large body of work has been devoted to defining and identifying clusters or communities in social and information networks. We explore from a novel perspective several questions related to identifying meaningful communities in large…

数据结构与算法 · 计算机科学 2008-10-13 Jure Leskovec , Kevin J. Lang , Anirban Dasgupta , Michael W. Mahoney

Theoretical attempts proposed so far to describe ordinary percolation processes on real-world networks rely on the locally tree-like ansatz. Such an approximation, however, holds only to a limited extent, as real graphs are often…

物理与社会 · 物理学 2016-03-30 Filippo Radicchi , Claudio Castellano

Geometric graphs appear in many real-world data sets, such as road networks, sensor networks, and molecules. We investigate the notion of distance between embedded graphs and present a metric to measure the distance between two geometric…

数据结构与算法 · 计算机科学 2024-07-15 Erin Wolf Chambers , Elizabeth Munch , Sarah Percival , Xinyi Wang

In the past two decades, significant advances have been made in understanding the structural and functional properties of biological networks, via graph-theoretic analysis. In general, most graph-theoretic studies are conducted in the…

物理与社会 · 物理学 2013-10-21 Michelle Rudolph-Lilith , Lyle E. Muller

Phylogenetic networks are a type of directed acyclic graph that represent how a set $X$ of present-day species are descended from a common ancestor by processes of speciation and reticulate evolution. In the absence of reticulate evolution,…

组合数学 · 数学 2017-08-11 Andrew Francis , Charles Semple , Mike Steel

To quantify the fundamental evolution of time-varying networks, and detect abnormal behavior, one needs a notion of temporal difference that captures significant organizational changes between two successive instants. In this work, we…

社会与信息网络 · 计算机科学 2017-08-17 Nathan D Monnig , Francois G Meyer

Driven by growing interest in the sciences, industry, and among the broader public, a large number of empirical studies have been conducted in recent years of the structure of networks ranging from the internet and the world wide web to…

社会与信息网络 · 计算机科学 2018-06-08 M. E. J. Newman

We introduce the tree distance, a new distance measure on graphs. The tree distance can be computed in polynomial time with standard methods from convex optimization. It is based on the notion of fractional isomorphism, a characterization…

离散数学 · 计算机科学 2021-04-30 Jan Böker

Two graph parameters are said to be coarsely equivalent if they are within constant factors from each other for every graph $G$. Recently, several graph parameters were shown to be coarsely equivalent to tree-length. Recall that the length…

组合数学 · 数学 2025-02-04 Feodor F. Dragan

The treewidth of a graph is an important invariant in structural and algorithmic graph theory. This paper studies the treewidth of line graphs. We show that determining the treewidth of the line graph of a graph $G$ is equivalent to…

组合数学 · 数学 2014-09-25 Daniel J. Harvey , David R. Wood

Interactions and relations between objects may be pairwise or higher-order in nature, and so network-valued data are ubiquitous in the real world. The "space of networks", however, has a complex structure that cannot be adequately described…

Various approaches and measures from network analysis have been applied to granular and particulate networks to gain insights into their structural, transport, failure-propagation and other systems-level properties. In this article, we…

软凝聚态物质 · 物理学 2019-11-06 Silvia Nauer , Lucas Böttcher , Mason A. Porter

We propose a family of graph structural indices related to the Matrix-forest theorem. The properties of the basic index that expresses the mutual connectivity of two vertices are studied in detail. The derivative indices that measure…

组合数学 · 数学 2007-05-23 Pavel Chebotarev , Elena Shamis

Phylogenetic networks which are, as opposed to trees, suitable to describe processes like hybridization and horizontal gene transfer, play a substantial role in evolutionary research. However, while non-treelike events need to be taken into…

种群与进化 · 定量生物学 2022-07-06 Mareike Fischer , Tom Niklas Hamann , Kristina Wicke

The investigation of social networks is often hindered by their size as such networks often consist of at least thousands of vertices and edges. Hence, it is of major interest to derive compact structures that represent important…

社会与信息网络 · 计算机科学 2023-09-28 Maximilian Stubbemann , Gerd Stumme

Networks may, or may not, be wired to have a core that is both itself densely connected and central in terms of graph distance. In this study we propose a coefficient to measure if the network has such a clear-cut core-periphery dichotomy.…

物理与社会 · 物理学 2007-05-23 Petter Holme

Phylogenetic trees are a central tool in understanding evolution. They are typically inferred from sequence data, and capture evolutionary relationships through time. It is essential to be able to compare trees from different data sources…

种群与进化 · 定量生物学 2017-10-31 Michelle Kendall , Caroline Colijn

In this paper, we study Gromov hyperbolicity and related parameters, that represent how close (locally) a metric space is to a tree from a metric point of view. The study of Gromov hyperbolicity for geodesic metric spaces can be reduced to…

数据结构与算法 · 计算机科学 2019-06-07 Jérémie Chalopin , Victor Chepoi , Feodor F. Dragan , Guillaume Ducoffe , Abdulhakeem Mohammed , Yann Vaxès

Network visualization allows a quick glance at how nodes (or actors) are connected by edges (or ties). A conventional network diagram of "contact tree" maps out a root and branches that represent the structure of nodes and edges, often…

社会与信息网络 · 计算机科学 2014-11-04 Arnaud Sallaberry , Yang-Chih Fu , Hwai-Chung Ho , Kwan-Liu Ma

Many data sets, crucial for today's applications, consist essentially of enormous networks, containing millions or even billions of elements. Having the possibility of visualizing such networks is of paramount importance. We propose an…

数据结构与算法 · 计算机科学 2023-07-25 Giuseppe Di Battista , Fabrizio Grosso , Silvia Montorselli , Maurizio Patrignani