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Classical ecological theory predicts that environmental stochasticity increases extinction risk by reducing the average per-capita growth rate of populations. To understand the interactive effects of environmental stochasticity, spatial…

概率论 · 数学 2015-12-16 Steven N. Evans , Peter L. Ralph , Sebastian J. Schreiber , Arnab Sen

In this paper, we discuss a hierarchical model, based on a Ricker competition model. The species considered are competing for resources and may be subject to an Allee effect due to mate limitation, anti-predator vigilance or aggression,…

种群与进化 · 定量生物学 2023-02-07 Eddy Kwessi

We review and extend results for mutation, selection, genetic drift, and migration in a one-dimensional continuous population. The population is described by a continuous limit of the stepping stone model, which leads to the stochastic…

种群与进化 · 定量生物学 2011-04-14 K. S. Korolev , Mikkel Avlund , Oskar Hallatschek , David R. Nelson

We study the stationary state of a population evolving under the action of random genetic drift, selection and recombination in which both deleterious and reverse beneficial mutations can occur. We find that the equilibrium fraction of…

种群与进化 · 定量生物学 2016-01-13 Sona John , Kavita Jain

Commonly recognized evolutionarily relevant effects of sexual reproduction include increased diversity, accelerated adaptation, and constrained accumulation of deleterious mutations, along with a secondary effect of species genotype…

种群与进化 · 定量生物学 2025-06-17 Assaf Marron , Smadar Szekely , Irun R. Cohen , David Harel

Is there an advantage to heterogeneity in a population where individuals grow and divide by fission? This is a broad question, to which there is no easy universal answer. This article aims to provide a quantitative answer in the specific…

偏微分方程分析 · 数学 2025-05-19 Marie Doumic , Anaïs Rat , Magali Tournus

We study a class of evolution models, where the breeding process involves an arbitrary exchangeable process, allowing for mutations to appear. The population size $n$ is fixed, hence after breeding, selection is applied. Individuals are…

概率论 · 数学 2022-05-03 Daniela Bertacchi , Juri Lember , Fabio Zucca

Here we present the first genome wide statistical test for recessive selection. This test uses explicitly non-equilibrium demographic differences between populations to infer the mode of selection. By analyzing the transient response to a…

种群与进化 · 定量生物学 2014-03-24 Daniel J. Balick , Ron Do , David Reich , Shamil R. Sunyaev

When a biological population expands into new territory, genetic drift develops an enormous influence on evolution at the propagating front. In such range expansion processes, fluctuations in allele frequencies occur through stochastic…

生物物理 · 物理学 2018-12-24 Sherry Chu , Mehran Kardar , David R. Nelson , Daniel A. Beller

Using a lattice model based on Monte Carlo simulations, we study the role of the reproduction pattern on the fate of an evolving population. Each individual is under the selection pressure from the environment and random mutations. The…

统计力学 · 物理学 2009-11-10 Mingfeng He , Hongbo Ruan , Changliang Yu , Lei Yao

We consider a version of large population games whose agents compete for resources using strategies with adaptable preferences. The games can be used to model economic markets, ecosystems or distributed control. Diversity of initial…

统计力学 · 物理学 2009-11-11 K. Y. Michael Wong , S. W. Lim , Zhuo Gao

In large asexual populations, multiple beneficial mutations arise in the population, compete, interfere with each other, and accumulate on the same genome, before any of them fix. The resulting dynamics, although studied by many authors, is…

种群与进化 · 定量生物学 2015-06-11 Daniel S. Fisher

We present a discrete-time model of a spatially structured population and explore the effects of coupling when the local dynamics contain a strong Allee effect and overcompensation. While an isolated population can exhibit only bistability…

动力系统 · 数学 2020-04-24 Irina Vortkamp , Sebastian J. Schreiber , Alan Hastings , Frank M. Hilker

In evolutionary dynamics, a key measure of a mutant trait's success is the probability that it takes over the population given some initial mutant-appearance distribution. This "fixation probability" is difficult to compute in general, as…

种群与进化 · 定量生物学 2022-02-18 Alex McAvoy , Benjamin Allen

The concept of fitness is central to evolution, but it quantifies only the expected number of offspring an individual will produce. The actual number of offspring is also subject to noise, arising from environmental or demographic…

种群与进化 · 定量生物学 2022-09-07 Guocheng Wang , Qi Su , Long Wang , Joshua B. Plotkin

When beneficial mutations are rare, they accumulate by a series of selective sweeps. But when they are common, many beneficial mutations will occur before any can fix, so there will be many different mutant lineages in the population…

种群与进化 · 定量生物学 2007-05-23 Michael M. Desai , Daniel S. Fisher

Investigations of a possible connection between population density and the propagation and magnitude of epidemics have so far led to mixed and unconvincing results. There are three reasons for that. (i) Previous studies did not focus on the…

物理与社会 · 物理学 2018-08-15 Ruiqi Li , Peter Richmond , Bertrand M. Roehner

The premise of genetic analysis is that a causal link exists between phenotypic and allelic variation. Yet it has long been documented that mutant phenotypes are not a simple result of a single DNA lesion, but rather are due to interactions…

基因组学 · 定量生物学 2014-06-04 Chris H. Chandler , Sudarshan Chari , Ian Dworkin

Random matrix theory successfully connects the structure of interactions of large ecological communities to their ability to respond to perturbations. One of the most debated aspects of this approach is the missing role of population…

种群与进化 · 定量生物学 2018-09-12 Theo Gibbs , Jacopo Grilli , Tim Rogers , Stefano Allesina

Migrations have played an important role in shaping the genetic diversity of human populations. Understanding genomic data thus requires careful modeling of historical gene flow. Here we consider the effect of relatively recent population…

种群与进化 · 定量生物学 2012-04-26 Simon Gravel
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