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We analyze the properties of seven community food webs from a variety of environments--including freshwater, marine-freshwater interfaces and terrestrial environments. We uncover quantitative unifying patterns that describe the properties…

无序系统与神经网络 · 物理学 2009-11-07 J. Camacho , R. Guimera , L. A. N. Amaral

Many real-world networks are so large that we must simplify their structure before we can extract useful information about the systems they represent. As the tools for doing these simplifications proliferate within the network literature,…

物理与社会 · 物理学 2015-05-13 M. Rosvall , D. Axelsson , C. T. Bergstrom

Dietary intake data are routinely drawn upon to explore diet-health relationships. However, these data are often subject to measurement error, distorting the true relationships. Beyond measurement error, there are likely complex synergistic…

A principle of evolutionary adaptation is applied to the Lotka--Volterra models, in particular to the food webs. We present a relatively simple computational algorithm of optimization with respect to a given criterion. This algorithm boils…

种群与进化 · 定量生物学 2021-09-06 Alexander S. Bratus , Anastasiia V. Korushkina , Artem S. Novozhilov

Over the past decade network theory has turned out to be a powerful methodology to investigate complex systems of various sorts. Through data analysis, modeling, and simulation quite an unparalleled insight into their structure, function,…

物理与社会 · 物理学 2010-07-16 Kimmo Kaski

The proliferation of online communities has created exciting opportunities to study the mechanisms that explain group success. While a growing body of research investigates community success through a single measure -- typically, the number…

社会与信息网络 · 计算机科学 2019-03-20 Tiago Cunha , David Jurgens , Chenhao Tan , Daniel Romero

We discuss models and data of crowd disasters, crime, terrorism, war and disease spreading to show that conventional recipes, such as deterrence strategies, are often not effective and sufficient to contain them. Many common approaches do…

The structure of ecological interactions is commonly understood through analyses of interaction networks. However, these analyses may be sensitive to sampling biases in both the interactors (the nodes of the network) and interactions (the…

Network-theoretic tools contribute to understanding real-world system dynamics, e.g., in wildlife conservation, epidemics, and power outages. Network visualization helps illustrate structural heterogeneity; however, details about…

社会与信息网络 · 计算机科学 2015-09-28 Kehinde R. Salau , Jacopo A. Baggio , Marco A. Janssen , Joshua K. Abbott , Eli P. Fenichel

Machine learning models are vulnerable to tiny adversarial input perturbations optimized to cause a very large output error. To measure this vulnerability, we need reliable methods that can find such adversarial perturbations. For image…

计算机视觉与模式识别 · 计算机科学 2024-07-15 Levente Halmosi , Bálint Mohos , Márk Jelasity

The study of complex systems in nature is essential to understand the interactions between different elements and how they influence one another. Complex network theory is a powerful tool that helps us to analyze these interactions and gain…

社会与信息网络 · 计算机科学 2024-10-28 Aurelienne A. S. Jorge , Douglas Uba , Alex A. Fernandes , Izabelly C. Costa , Leonardo B. L. Santos

Complex networks are universal, arising in fields as disparate as sociology, physics, and biology. In the past decade, extensive research into the properties and behaviors of complex systems has uncovered surprising commonalities among the…

其他定量生物学 · 定量生物学 2015-06-26 Claire Christensen , Reka Albert

When humans navigate a crowed space such as a university campus or the sidewalks of a busy street, they follow common sense rules based on social etiquette. In this paper, we argue that in order to enable the design of new algorithms that…

计算机视觉与模式识别 · 计算机科学 2016-01-07 Alexandre Robicquet , Alexandre Alahi , Amir Sadeghian , Bryan Anenberg , John Doherty , Eli Wu , Silvio Savarese

In the modeling, monitoring, and control of complex networks, a fundamental problem concerns the comprehensive determination of the state of the system from limited measurements. Using power grids as example networks, we show that this…

物理与社会 · 物理学 2013-01-28 Yang Yang , Jianhui Wang , Adilson E. Motter

Inspired by empirical studies of networked systems such as the Internet, social networks, and biological networks, researchers have in recent years developed a variety of techniques and models to help us understand or predict the behavior…

统计力学 · 物理学 2015-06-24 M. E. J. Newman

The stability of a complex system generally decreases with increasing system size and interconnectivity, a counterintuitive result of widespread importance across the physical, life, and social sciences. Despite recent interest in the…

种群与进化 · 定量生物学 2020-05-20 A. Bradley Duthie

Many community detection algorithms require the introduction of a measure on the set of nodes. Previously, a lot of efforts have been made to find the top-performing measures. In most cases, experiments were conducted on several datasets or…

社会与信息网络 · 计算机科学 2021-11-03 Rinat Aynulin

Explaining predictions based on multivariate time series data carries the additional difficulty of handling not only multiple features, but also time dependencies. It matters not only what happened, but also when, and the same feature could…

机器学习 · 计算机科学 2023-05-31 Joseph Enguehard

Systems biology models are useful models of complex biological systems that may require a large amount of experimental data to fit each model's parameters or to approximate a likelihood function. These models range from a few to thousands…

定量方法 · 定量生物学 2024-07-12 Vincent D. Zaballa , Elliot E. Hui

Biological systems (among others) may respond to a large variety of distinct external stimuli, or signals. These perturbations will generally be presented to the system not singly, but in various combinations, so that a proper understanding…

定量方法 · 定量生物学 2011-06-24 Dennis Wylie