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We propose an evolutionary mechanism of phyllotaxis, regular arrangement of leaves on a plant stem. It is shown that the phyllotactic pattern with the Fibonacci sequence has a selective advantage, for it involves the least number of…

生物物理 · 物理学 2015-03-17 Takuya Okabe

A model of the regular arrangement of leaves on a plant stem (phyllotactic patterns) is proposed, based on a new plant pattern algorithm. Tripartite patterning is proposed to occur by the interaction of two signaling pathways. Each pathway…

组织与器官 · 定量生物学 2009-07-29 F. W. Cummings

Phyllotaxis describes the arrangement of florets, scales or leaves in composite flowers or plants (daisy, aster, sunflower, pinecone, pineapple). As a structure, it is a geometrical foam, the most homogeneous and densest covering of a large…

软凝聚态物质 · 物理学 2016-02-02 Nicolas Rivier , Jean-François Sadoc , Jean Charvolin

We consider the evolution of the packing of disks (representing the position of buds) that are introduced at the top of a surface which has the form of a growing stem. They migrate downwards, while conforming to three principles, applied…

软凝聚态物质 · 物理学 2017-02-28 Adil Mughal , Denis Weaire

Phyllotaxis, the search for the most homogeneous and dense organizations of small disks inside a large circular domain, was first developed to analyze arrangements of leaves or florets in plants. Then it has become an object of study not…

无序系统与神经网络 · 物理学 2012-04-30 Jean-François Sadoc , Nicolas Rivier , Jean Charvolin

Phyllotactic patterns, i.e. regular arrangements of leaves or seeds around a plant stem, are fascinating examples of complex structures encountered in Nature. In botany, their symmetries develop when a new primordium periodically grows in…

化学物理 · 物理学 2024-10-03 Giulio Facchini , Marcello Budroni , Gabor Schuszter , Fabian Brau , Anne De Wit

The purpose of this paper is to present a model of a phenomenon of plant stem morphogenesis observed by Cesar Gomez-Campo in 1970. We consider a simplified model of auxin dynamics in plant stems, showing that, after creation of the original…

定量方法 · 定量生物学 2021-12-13 Larry Harper , Greg Huey

Propulsion by growing actin networks is a universal mechanism used in many different biological systems. Although the core molecular machinery for actin network growth is well preserved in most cases, the geometry of the propelled obstacle…

生物物理 · 物理学 2013-04-16 Julian Weichsel , Ulrich S. Schwarz

One of humanity's earliest mathematical inquiries might have involved the geometric patterns in plants. The arrangement of leaves on a branch, seeds in a sunflower, and spines on a cactus exhibit repeated spirals, which appear with an…

斑图形成与孤子 · 物理学 2021-01-11 Hyun-Woo Lee , Leonid Levitov

The paper considers existence results of solution for a linear coupled system of Boltzmann transport equations and related inverse problem. The system models the evolution of three species of particles, photons, electrons and positrons.…

偏微分方程分析 · 数学 2019-12-02 Jouko Tervo

The principles underlying plant development are extended to allow a more molecular mechanism to elaborate the schema by which ground cells differentiate into vascular cells. Biophysical considerations dictate that linear dynamics are not…

定量方法 · 定量生物学 2009-05-29 Pavel Dimitrov , Steven W. Zucker

Turing patterns are fundamental in biophysics, emerging from short-range activation and long-range inhibition processes. However, their paradigm is based on diffusive transport processes, which yields Turing patters that are less sharp than…

软凝聚态物质 · 物理学 2023-11-13 Benjamin M. Alessio , Ankur Gupta

We investigate the pushed-to-pulled transition for a minimal model for invasive fronts influence by ``aerotaxis,'' that is, when organisms follow oxygen gradients. We consider two singular reaction-advection-diffusion models for this. The…

偏微分方程分析 · 数学 2026-03-31 Mete Demircigil , Christopher Henderson

In this article we are interested in the differential geometric properties of certain higher direct images of exterior powers of the sheaf of relative differentials twisted with a line bundle. We obtain explicit curvature formulas,…

微分几何 · 数学 2020-09-09 Bo Berndtsson , Mihai Paun , Xu Wang

We study a class of minimal geometric partial differential equations that serves as a framework to understand the evolution of boundaries between states in different pattern forming systems. The framework combines normal growth, curvature…

偏微分方程分析 · 数学 2023-11-06 James H. von Brecht , Scott G. McCalla , Eun Heui Kim

We investigate fractal aspects of elliptical polynomial spirals; that is, planar spirals with differing polynomial rates of decay in the two axis directions. We give a full dimensional analysis of these spirals, computing explicitly their…

经典分析与常微分方程 · 数学 2024-03-20 Stuart A. Burrell , Kenneth J. Falconer , Jonathan M. Fraser

The shape of the cross section of a dense fiber bundle is related to the symmetry of its molecular packing. However, this statement might be belied by type I collagen fibrils which have a rounded section of high symmetry while structural…

软凝聚态物质 · 物理学 2013-03-22 Jean Charvolin , Jean-François Sadoc

Jean's `Fundamental Theorem of Phyllotaxis' (\emph{Phyllotaxis: a systematic study in Plant Morphogenesis}, CUP 1994) describes the relationship between the count numbers of observed spirals in cylindrical lattices and the horizontal angle…

组织与器官 · 定量生物学 2024-07-10 Jonathan Swinton

The selection of the most suitable evolutionary model to analyze the given molecular data is usually left to biologist's choice. In his famous book, J Felsenstein suggested that certain linear equations satisfied by the expected…

种群与进化 · 定量生物学 2012-11-20 Marta Casanellas , Jesus Fernandez-Sanchez , Anna Kedzierska

Turing's theory of pattern formation has been used to describe the formation of self-organised periodic patterns in many biological, chemical and physical systems. However, the use of such models is hindered by our inability to predict, in…

斑图形成与孤子 · 物理学 2021-02-03 Srikanth Subramanian , Sean M. Murray
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