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This article shows how 3D geometric morphometric data can be analyzed using newly developed distance-based evolutionary tree inference methods, with extensions to planar graphs. Application of these methods to 3D representations of the…

种群与进化 · 定量生物学 2015-01-05 Peter J. Waddell

How did written works evolve, disappear or survive down through the ages? In this paper, we propose a unified, formal framework for two fundamental questions in the study of the transmission of texts: how much was lost or preserved from all…

种群与进化 · 定量生物学 2022-11-01 Jean-Baptiste Camps , Julien Randon-Furling

Migration is a key mechanism for expansion of communities. In spatially heterogeneous environments, rapidly gaining knowledge about the local environment is key to the evolutionary success of a migrating population. For historical human…

种群与进化 · 定量生物学 2016-12-07 Dong Wang , Michael W. Deem

Whole genome sequencing of pathogens from multiple hosts in an epidemic offers the potential to investigate who infected whom with unparalleled resolution, potentially yielding important insights into disease dynamics and the impact of…

In the human genomes, recombination frequency between homologous chromosomes during meiosis is highly correlated with their physical length while it differs significantly when their coding density is considered. Furthermore, it has been…

种群与进化 · 定量生物学 2010-02-01 Dorota Mackiewicz , Marta Zawierta , Wojciech Waga , Stanislaw Cebrat

Defining the processes involved in the technical/cultural shifts from the Late Middle to the Early Upper Palaeolithic in Europe (~50-39 thousand years BP) is one of the most important tasks facing prehistoric studies. In this debate Italy…

An important question in genome evolution is whether there exist fragile regions (rearrangement hotspots) where chromosomal rearrangements are happening over and over again. Although nearly all recent studies supported the existence of…

基因组学 · 定量生物学 2010-11-02 Max A. Alekseyev , Pavel A. Pevzner

Unraveling the evolutionary forces shaping bacterial diversity can today be tackled using a growing amount of genomic data. While the genome of eukaryotes is highly stable, bacterial genomes from cells of the same species highly vary in…

种群与进化 · 定量生物学 2015-03-19 Franz Baumdicker , Peter Pfaffelhuber

Phylogeny can be inferred using two sources of data from an organism: morphological data and molecular data. Historically, phylogenies were usually inferred using morphological characters, but some morphological features may not necessarily…

种群与进化 · 定量生物学 2023-12-19 Ray Han

There is an urgent and well-recognized need to extend genetic studies to diverse populations, but several obstacles continue to be prohibitive, including (but not limited to) the difficulty of recruiting individuals from diverse populations…

种群与进化 · 定量生物学 2021-09-28 Charleston W. K. Chiang

A phylogeny describes the evolutionary history of an evolving population. Evolutionary search algorithms can perfectly track the ancestry of candidate solutions, illuminating a population's trajectory through the search space. However,…

神经与进化计算 · 计算机科学 2024-02-05 Alexander Lalejini , Marcos Sanson , Jack Garbus , Matthew Andres Moreno , Emily Dolson

Identifying drivers of complex traits from the noisy signals of genetic variation obtained from high throughput genome sequencing technologies is a central challenge faced by human geneticists today. We hypothesize that the variants…

种群与进化 · 定量生物学 2013-06-18 M. Cyrus Maher , Lawrence H. Uricchio , Dara G. Torgerson , Ryan D. Hernandez

Ignoring the differences between countries, human reproductive and dispersal behaviors can be described by some standardized models, so whether there is a universal law of population growth hidden in the abundant and unstructured data from…

物理与社会 · 物理学 2024-02-08 Jiajun Ma , Qinghua Chen , Xiaosong Chen , Jingfang Fan , Xiaomeng Li , Yi Shi

The link between age and migration propensity is long established, but existing models of country-level net migration ignore the effect of population age distribution on past and projected migration rates. We propose a method to estimate…

应用统计 · 统计学 2026-05-11 Nathan G. Welch , Hana Ševčíková , Adrian E. Raftery

Sex difference in allele frequency is an emerging topic that is critical to our understanding of ascertainment bias, as well as data quality particularly of the largely overlooked X chromosome. To detect sex difference in allele frequency…

应用统计 · 统计学 2022-12-26 Zhong Wang , Andrew D. Paterson , Lei Sun

The athletic achievements of African athletes in global running championships have long been subject to scientific and sociological inquiry. During the 1990s, a popular narrative emerged, suggesting that West African lineage conferred…

物理与社会 · 物理学 2024-03-06 Tade Souaiaia , Nabie Fofanah , Rawle DeLisle , Sheena Mason

Cross-border migration brings economic and cultural impacts to the origin and destination, and is also a key to reflect the international relations of related countries. In fact, the migration relationships of countries are complex and…

物理与社会 · 物理学 2020-08-27 Wensha Gou , Siyu Huang , Qinghua Chen , Jiawei Chen , Xiaomeng Li

Modelling migration is complicated, as people move for many reasons. Some leave their country for the first time, others return to places they once called home, or move on to new destinations. However, most models focus only on who arrives,…

物理与社会 · 物理学 2025-11-25 Carsten Källner , Ola Ali , Andrea Vismara , Guillermo Prieto-Viertel , Rafael Prieto-Curiel

Background: Hybridogenesis is a very interesting example of reproduction which seems to integrate the sexual and clonal processes in one system. In a case of frogs, described in the paper, two parental species - Rana lessonae and Rana…

基因组学 · 定量生物学 2009-03-18 Mateusz Kula , Katarzyna Bonkowska , Maria Ogielska , Piotr Kierzkowski , Anna Zalesna , Stanislaw Cebrat