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We consider the evolution of a population of fixed size with no selection. The number of generations $G$ to reach the first common ancestor evolves in time. This evolution can be described by a simple Markov process which allows one to…

统计力学 · 物理学 2009-09-29 Damien Simon , Bernard Derrida

For a one-locus haploid infinite population with discrete generations, the celebrated Kingman's model describes the evolution of fitness distributions under the competition of selection and mutation, with a constant mutation probability.…

概率论 · 数学 2021-06-01 Linglong Yuan

This paper considers a point process model with a monotonically decreasing or increasing ROCOF and the underlying distributions from the location-scale family, known as the geometric process (Lam, 1988). In terms of repairable system…

统计方法学 · 统计学 2010-10-27 Mark Kaminskiy , Vasiliy Krivtsov

We consider a general, neutral, dynamical model of biodiversity. Individuals have i.i.d. lifetime durations, which are not necessarily exponentially distributed, and each individual gives birth independently at constant rate \lambda. We…

种群与进化 · 定量生物学 2010-09-02 Amaury Lambert

Molecular phenotypes are important links between genomic information and organismic functions, fitness, and evolution. Complex phenotypes, which are also called quantitative traits, often depend on multiple genomic loci. Their evolution…

种群与进化 · 定量生物学 2015-06-12 Armita Nourmohammad , Stephan Schiffels , Michael Laessig

We present a quantitative model for the biological evolution of species body masses within large groups of related species, e.g., terrestrial mammals, in which body mass M evolves according to branching (speciation), multiplicative…

种群与进化 · 定量生物学 2009-01-22 Aaron Clauset , Sidney Redner

In this paper we consider a microscopic model of a simple ecosystem. The basic ingredients of this model are individuals, and both the phenotypic and genotypic levels are taken in account. The model is based on a long range cellular…

统计力学 · 物理学 2007-05-23 Franco Bagnoli , Michele Bezzi

In this research, we present a generalized quasispecies model in which population growth is governed by an arbitrary nonlinear function incorporating time delays. We begin by demonstrating that, under the constant population constraint, the…

动力系统 · 数学 2025-08-19 Nolbert Morales , Edward A. Turner

The aim of this paper is two-fold. First, we propose a new computational method to investigate the particularities of evolution. Second, we apply this method to a model of gene regulatory networks (GRNs) and explore the evolution of…

分子网络 · 定量生物学 2022-01-21 Tadamune Kaneko , Macoto Kikuchi

We demonstrate with a thought experiment that fitness-based population dynamical approaches to evolution are not able to make quantitative, falsifiable predictions about the long-term behavior of evolutionary systems. A key characteristic…

种群与进化 · 定量生物学 2015-05-14 Peter Klimek , Stefan Thurner , Rudolf Hanel

A simple model of species origin resulted from dynamic features of a population, solely, is developed. The model is based on the evolution optimality in space distribution, and the selection is gone over the mobility. Some biological issues…

种群与进化 · 定量生物学 2008-04-25 Michael G. Sadovsky

We discuss a simple model of co-evolution. In order to emphasise the effect of interaction between individuals the entire population is subjected to the same physical environment. Species are emergent structures and extinction, origination…

统计力学 · 物理学 2007-05-23 Kim Christensen , Simone A. di Collobiano , Matt Hall , Henrik J. Jensen

The concept of fitness is introduced, and a simple derivation of the Fundamental Theorem of Natural Selection (which states that the average fitness of a population increases if its variance is nonzero) is given. After a short discussion of…

凝聚态物理 · 物理学 2008-02-03 Luca Peliti

We seek models for the genotype evolution of agricultural animals, animals involved in primary production processes. Classical models for genotype evolution have tended to be very simple in order that analytic methods may be employed in…

定量方法 · 定量生物学 2017-12-15 Vladimir Obolonkin , Anatoly Zherelo , George Krylov , Murray Jorgensen , Richard Spelman

We present a model for evolution and extinction in large ecosystems. The model incorporates the effects of interactions between species and the influences of abiotic environmental factors. We study the properties of the model by approximate…

adap-org · 物理学 2008-02-03 Bruce W. Roberts , M. E. J. Newman

Generalized models provide a framework for the study of evolution equations without specifying all functional forms. The generalized formulation of problems has been shown to facilitate the analytical investigation of local dynamics and has…

动力系统 · 数学 2014-06-24 Christian Kuehn , Stefan Siegmund , Thilo Gross

The distribution of species body size within taxonomic groups exhibits a heavy right-tail extending over many orders of magnitude, where most species are significantly larger than the smallest species. We provide a simple model of…

种群与进化 · 定量生物学 2009-01-05 Aaron Clauset , Douglas H. Erwin

We study a continuous-time dynamical system that models the evolving distribution of genotypes in an infinite population where genomes may have infinitely many or even a continuum of loci, mutations accumulate along lineages without…

种群与进化 · 定量生物学 2009-02-03 Aubrey Clayton , Steven N. Evans

We motivate and explore the basic features of generalized contagion, a model mechanism that unifies fundamental models of biological and social contagion. Generalized contagion builds on the elementary observation that spreading and…

物理与社会 · 物理学 2017-09-01 Peter Sheridan Dodds

Fisheries scientists use regression models to estimate population quantities, such as biomass or abundance, for use in climate, habitat, stock, and ecosystem assessments. However, these models are sensitive to the chosen probability…

统计方法学 · 统计学 2025-01-13 Jillian C. Dunic , Jason Conner , Sean C. Anderson , James T. Thorson