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Two mathematical models of macroevolution are studied. These models have population dynamics at the species level, and mutations and extinction of species are also included. The population dynamics are updated by difference equations with…

种群与进化 · 定量生物学 2014-04-16 Yohsuke Murase , Takashi Shimada , Nobuyasu Ito , Per Arne Rikvold

Environmental changes greatly influence the evolution of populations. Here, we study the dynamics of a population of two strains, one growing slightly faster than the other, competing for resources in a time-varying binary environment…

种群与进化 · 定量生物学 2020-07-28 Ami Taitelbaum , Robert West , Michael Assaf , Mauro Mobilia

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

适应与自组织系统 · 物理学 2012-08-31 Andrzej Pekalski , Marcel Ausloos

We study an ecology-inspired model for a population of bounded size, whose dynamics is governed by random birth, death, and immigration events. Stochastic fluctuations in the number of individuals give rise to a succession of alternating…

种群与进化 · 定量生物学 2026-05-27 Lucas M. Brugevin , Damián H. Zanette

This article deals with the emergence of a specific mating preference pattern called homogamy in a population. Individuals are characterized by their genotype at two haploid loci, and the population dynamics is modelled by a non-linear…

概率论 · 数学 2019-09-25 Coron Camille , Costa Manon , Laroche Fabien , Leman Hélène , Smadi Charline

The dynamics of two competing species in a finite size community is one of the most studied problems in population genetics and community ecology. Stochastic fluctuations lead, inevitably, to the extinction of one of the species, but the…

种群与进化 · 定量生物学 2016-11-30 Matan Danino , David A. Kessler , Nadav M. Shnerb

Sexually reproducing populations with small number of individuals may go extinct by stochastic fluctuations in sex determination, causing all their members to become male or female in a generation. In this work we calculate the time to…

种群与进化 · 定量生物学 2012-10-24 David M. Schneider , Eduardo do Carmo , Yaneer Bar-Yam , Marcus A. M. de Aguiar

We consider a stochastic model of population dynamics where each individual is characterised by a trait in {0,1,...,L} and has a natural reproduction rate, a logistic death rate due to age or competition and a probability of mutation…

概率论 · 数学 2019-02-12 Anton Bovier , Loren Coquille , Charline Smadi

Biological populations are subject to two types of noise: demographic stochasticity due to fluctuations in the reproductive success of individuals, and environmental variations that affect coherently the relative fitness of entire…

种群与进化 · 定量生物学 2018-04-04 Matan Danino , David A. Kessler , Nadav M. Shnerb

Extinction of a long-lived isolated stochastic population can be described as an exponentially slow decay of quasi-stationary probability distribution of the population size. We address extinction of a population in a two-population system…

统计力学 · 物理学 2015-05-14 Michael Khasin , Baruch Meerson , Pavel V. Sasorov

The abundance of a species' population in an ecosystem is rarely stationary, often exhibiting large fluctuations over time. Using historical data on marine species, we show that the year-to-year fluctuations of population growth rate obey a…

适应与自组织系统 · 物理学 2015-06-02 Jie Sun , Sean P. Cornelius , John Janssen , Kimberly A. Gray , Adilson E. Motter

Environment plays a fundamental role in the competition for resources, and hence in the evolution of populations. Here, we study a well-mixed, finite population consisting of two strains competing for the limited resources provided by an…

种群与进化 · 定量生物学 2017-10-16 Karl Wienand , Erwin Frey , Mauro Mobilia

We consider an exponentially growing population of cells undergoing mutations and ask about the effect of reproductive fluctuations (genetic drift) on its long-term evolution. We combine first step analysis with the stochastic dynamics of a…

种群与进化 · 定量生物学 2022-03-14 Arman Angaji , Christoph Velling , Johannes Berg

Models of population growth and extinction are an increasingly popular subject of study. However, consequences of stochasticity and noise in shaping distributions and outcomes are not sufficiently explored. Here we consider a distributed…

统计力学 · 物理学 2020-11-11 Bertrand Ottino-Löffler , Mehran Kardar

Populations evolving under the joint influence of recombination and resampling (traditionally known as genetic drift) are investigated. First, we summarise and adapt a deterministic approach, as valid for infinite populations, which assumes…

种群与进化 · 定量生物学 2009-02-20 Ellen Baake , Inke Herms

We examine birth--death processes with state dependent transition probabilities and at least one absorbing boundary. In evolution, this describes selection acting on two different types in a finite population where reproductive events occur…

种群与进化 · 定量生物学 2010-10-12 Philipp M. Altrock , Chaytanya S. Gokhale , Arne Traulsen

Environmental variability greatly influences the eco-evolutionary dynamics of a population, i.e. it affects how its size and composition evolve. Here, we study a well-mixed population of finite and fluctuating size whose growth is limited…

种群与进化 · 定量生物学 2021-10-14 Karl Wienand , Erwin Frey , Mauro Mobilia

We study the evolutionary dynamics of a haploid population of infinite size recombining with a probability $r$ in a two locus model. Starting from a low fitness locus, the population is evolved under mutation, selection and recombination…

种群与进化 · 定量生物学 2010-05-04 Kavita Jain

We study the dynamics of a two-site model in which the tunneling amplitude between the sites is not constant but rather a high-frequency noise. Obviously, the population imbalance in this model decays exponentially with time. Remarkably,…

无序系统与神经网络 · 物理学 2024-06-19 V. V. Mkhitaryan , M. E. Raikh

Tumors initiate when a population of proliferating cells accumulates a certain number and type of genetic and/or epigenetic alterations. The population dynamics of such sequential acquisition of (epi)genetic alterations has been the topic…

种群与进化 · 定量生物学 2015-04-09 Peter Ashcroft , Franziska Michor , Tobias Galla
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