相关论文: On the Robustness of NK-Kauffman Networks Against …
Nested canalizing Boolean (NCF) functions play an important role in biological motivated regulative networks and in signal processing, in particular describing stack filters. It has been conjectured that NCFs have a stabilizing effect on…
Boolean threshold networks have recently been proposed as useful tools to model the dynamics of genetic regulatory networks, and have been successfully applied to describe the cell cycles of \textit{S. cerevisiae} and \textit{S. pombe}.…
Probabilistic Boolean Networks have been proposed for estimating the behaviour of dynamical systems as they combine rule-based modelling with uncertainty principles. Inferring PBNs directly from gene data is challenging however, especially…
We prove that, to compute a Boolean function $f$ on $N$ variables with error probability $\epsilon$, any quantum black-box algorithm has to query at least $\frac{1 - 2\sqrt{\epsilon}}{2} \rho_f N = \frac{1 - 2\sqrt{\epsilon}}{2} \bar{S}_f$…
We discuss quantum algorithms, based on the Bernstein-Vazirani algorithm, for finding which variables a Boolean function depends on. There are 2^n possible linear Boolean functions of n variables; given a linear Boolean function, the…
Spectral decomposition of dynamical systems is a popular methodology to investigate the fundamental qualitative and quantitative properties of these systems and their solutions. In this chapter, we consider a class of nonlinear cooperative…
The growth in number and nature of dynamical attractors in Kauffman NK network models are still not well understood properties of these important random boolean networks. Structural circuits in the underpinning graph give insights into the…
A Boolean network (BN) with $n$ components is a discrete dynamical system described by the successive iterations of a function $f:\{0,1\}^n\to\{0,1\}^n$. In most applications, the main parameter is the interaction graph of $f$: the digraph…
Nonparametric learning is a fundamental concept in machine learning that aims to capture complex patterns and relationships in data without making strong assumptions about the underlying data distribution. Owing to simplicity and…
Recent deep learning extensions in Koopman theory have enabled compact, interpretable representations of nonlinear dynamical systems which are amenable to linear analysis. Deep Koopman networks attempt to learn the Koopman eigenfunctions…
Boolean networks are special types of finite state time-discrete dynamical systems. A Boolean network can be described by a function from an n-dimensional vector space over the field of two elements to itself. A fundamental problem in…
We prove that any submodular function f: {0,1}^n -> {0,1,...,k} can be represented as a pseudo-Boolean 2k-DNF formula. Pseudo-Boolean DNFs are a natural generalization of DNF representation for functions with integer range. Each term in…
We investigate the influences of variables on a Boolean function $f$ based on the quantum Bernstein-Vazirani algorithm. A previous paper (Floess et al. in Math. Struct. in Comp. Science 23: 386, 2013) has proved that if a $n$-variable…
Random Boolean networks were introduced in 1969 by Kauffman as a model for gene regulation. By combining analytical arguments and efficient numerical simulations, we evaluate the properties of relevant components of critical random Boolean…
k-connectivity of random graphs is a fundamental property indicating reliability of multi-hop wireless sensor networks (WSN). WSNs comprising of sensor nodes with limited power resources are modeled by random graphs with unreliable nodes,…
Random K-out graphs are garnering interest in designing distributed systems including secure sensor networks, anonymous crypto-currency networks, and differentially-private decentralized learning. In these security-critical applications, it…
We introduce the nested canalyzing depth of a function, which measures the extent to which it retains a nested canalyzing structure. We characterize the structure of functions with a given depth and compute the expected activities and…
Physics-informed neural networks (PINNs) are demonstrating remarkable promise in integrating physical models with gappy and noisy observational data, but they still struggle in cases where the target functions to be approximated exhibit…
We define and study the complexity of robust polynomials for Boolean functions and the related fault-tolerant quantum decision trees, where input bits are perturbed by noise. We compare several different possible definitions. Our main…
Bayesian optimization of function networks (BOFN) is a framework for optimizing expensive-to-evaluate objective functions structured as networks, where some nodes' outputs serve as inputs for others. Many real-world applications, such as…