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相关论文: Evolution in random fitness landscapes: the infini…

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We consider the evolutionary trajectories traced out by an infinite population undergoing mutation-selection dynamics in static, uncorrelated random fitness landscapes. Starting from the population that consists of a single genotype, the…

种群与进化 · 定量生物学 2009-11-11 Kavita Jain , Joachim Krug

For a one-locus haploid infinite population with discrete generations, the celebrated Kingman's model describes the evolution of fitness distributions under the competition of selection and mutation, with a constant mutation probability.…

概率论 · 数学 2021-06-01 Linglong Yuan

We consider an asexual biological population of constant size $N$ evolving in discrete time under the influence of selection and mutation. Beneficial mutations appear at rate $U$ and their selective effects $s$ are drawn from a distribution…

种群与进化 · 定量生物学 2015-05-14 Su-Chan Park , Damien Simon , Joachim Krug

We investigate the evolutionary dynamics of a finite population of sequences adapting to NK fitness landscapes. We find that, unlike in the case of an infinite population, the average fitness in a finite population is maximized at a small…

生物物理 · 物理学 2009-11-07 Paulo R. A. Campos , Christoph Adami , Claus O. Wilke

Kingman's model describes the evolution of a one-locus haploid population of infinite size and discrete generations under the competition of selection and mutation. A random generalisation has been made in a previous paper which assumes all…

概率论 · 数学 2020-12-01 Linglong Yuan

We consider the evolution of large but finite populations on arbitrary fitness landscapes. We describe the evolutionary process by a Markov, Moran process. We show that to $\mathcal O(1/N)$, the time-averaged fitness is lower for the finite…

种群与进化 · 定量生物学 2015-06-04 Dirk M. Lorenz , Jeong-Man Park , Michael W. Deem

Evolutionary models for populations of constant size are frequently studied using the Moran model, the Wright-Fisher model, or their diffusion limits. When evolution is neutral, a random genealogy given through Kingman's coalescent is used…

种群与进化 · 定量生物学 2012-07-31 Peter Pfaffelhuber , Benedikt Vogt

Kingman's House-of-Cards model is a simple and celebrated model to describe the evolution of population under the competition of selection and mutation. Letting mutation probabilities vary on generations makes the model more realistic and…

概率论 · 数学 2019-11-26 Linglong Yuan

Predicting the adaptation of populations to a changing environment is crucial to assess the impact of human activities on biodiversity. Many theoretical studies have tackled this issue by modeling the evolution of quantitative traits…

偏微分方程分析 · 数学 2022-06-28 Jimmy Garnier , O Cotto , T Bourgeron , E Bouin , T Lepoutre , O Ronce , V Calvez

We consider a model of asexually reproducing individuals with random mutations and selection. The rate of mutations is proportional to the population size, $N$. The mutations may be either beneficial or deleterious. In a paper by Yu,…

概率论 · 数学 2015-08-20 Michael Kelly

We consider a periodic extension of the classical Kingman non-linear model (Kingman, 1978) for the balance between selection and mutation in a large population. In the original model, the fitness distribution of the population is modeled by…

概率论 · 数学 2024-05-24 Camille Coron , Olivier Hénard

We considered a {multi-block} molecular model of biological evolution, in which fitness is a function of the mean types of alleles located at different parts (blocks) of the genome. We formulated an infinite population model with selection…

种群与进化 · 定量生物学 2015-06-12 David B. Saakian , Zara Kirakosyan , Chin-Kun Hu

In this article, a stochastic individual-based model describing Darwinian evolution of asexual, phenotypic trait-structured population, is studied. We consider a large population with constant population size characterised by a resampling…

概率论 · 数学 2024-07-09 Nicolas Champagnat , Vincent Hass

We consider a fitness-structured population model with competition and migration between nearest neighbors. Under a combination of large population and rare migration limits we are particularly interested in the asymptotic behavior of the…

概率论 · 数学 2012-07-20 Anton Bovier , Shi-Dong Wang

We consider a stochastic individual-based model for the evolution of a haploid, asexually reproducing population. The space of possible traits is given by the vertices of a (possibly directed) finite graph $G=(V,E)$. The evolution of the…

概率论 · 数学 2020-03-10 Loren Coquille , Anna Kraut , Charline Smadi

We study a class of evolution models, where the breeding process involves an arbitrary exchangeable process, allowing for mutations to appear. The population size $n$ is fixed, hence after breeding, selection is applied. Individuals are…

概率论 · 数学 2022-05-03 Daniela Bertacchi , Juri Lember , Fabio Zucca

This Letter studies the quasispecies dynamics of a population capable of genetic repair evolving on a time-dependent fitness landscape. We develop a model that considers an asexual population of single-stranded, conservatively replicating…

种群与进化 · 定量生物学 2009-11-13 Pavel Gorodetsky , Emmanuel Tannenbaum

Biological evolution can be conceptualized as a search process in the space of gene sequences guided by the fitness landscape, a mapping that assigns a measure of reproductive value to each genotype. Here we discuss probabilistic models of…

种群与进化 · 定量生物学 2024-04-10 Joachim Krug , Daniel Oros

This is an introductory review of deterministic mutation-selection models for asexual populations (i.e., quasispecies theory) and related topics. First, the basic concepts of fitness, mutations, and sequence space are introduced. Different…

种群与进化 · 定量生物学 2007-07-26 Kavita Jain , Joachim Krug

A common view in evolutionary biology is that mutation rates are minimised. However, studies in combinatorial optimisation and search have shown a clear advantage of using variable mutation rates as a control parameter to optimise the…

种群与进化 · 定量生物学 2019-08-27 Roman V. Belavkin , Alastair Channon , Elizabeth Aston , John Aston , Rok Krasovec , Christopher G. Knight
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