中文

Offdiagonal Complexity: A computationally quick complexity measure for graphs and networks

分子网络 2010-03-11 v2 定量方法

摘要

A vast variety of biological, social, and economical networks shows topologies drastically differing from random graphs; yet the quantitative characterization remains unsatisfactory from a conceptual point of view. Motivated from the discussion of small scale-free networks, a biased link distribution entropy is defined, which takes an extremum for a power law distribution. This approach is extended to the node-node link cross-distribution, whose nondiagonal elements characterize the graph structure beyond link distribution, cluster coefficient and average path length. From here a simple (and computationally cheap) complexity measure can be defined. This Offdiagonal Complexity (OdC) is proposed as a novel measure to characterize the complexity of an undirected graph, or network. While both for regular lattices and fully connected networks OdC is zero, it takes a moderately low value for a random graph and shows high values for apparently complex structures as scale-free networks and hierarchical trees. The Offdiagonal Complexity apporach is applied to the Helicobacter pylori protein interaction network and randomly rewired surrogates.

关键词

引用

@article{arxiv.q-bio/0410024,
  title  = {Offdiagonal Complexity: A computationally quick complexity measure for graphs and networks},
  author = {Jens Christian Claussen},
  journal= {arXiv preprint arXiv:q-bio/0410024},
  year   = {2010}
}

备注

12 pages, revised version, to appear in Physica A