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The robustness of an ecological network quantifies the resilience of the ecosystem it represents to species loss. It corresponds to the proportion of species that are disconnected from the rest of the network when extinctions occur…

种群与进化 · 定量生物学 2021-11-25 Saint-Clair Chabert-Liddell , Pierre Barbillon , Sophie Donnet

The structure of a bipartite interaction network can be described by providing a clustering for each of the two types of nodes. Such clusterings are outputted by fitting a Latent Block Model (LBM) on an observed network that comes from a…

统计方法学 · 统计学 2025-03-19 Emre Anakok , Pierre Barbillon , Colin Fontaine , Elisa Thebault

We investigate how the pattern of contacts between species in mutualistic ecosystems is affected by the phylogenetic proximity between the species of each guild. We develop several theoretical tools to measure that effect and we use them to…

种群与进化 · 定量生物学 2010-08-02 R. P. J. Perazzo , Laura Hernández , Horacio Ceva , Enrique Burgos , José Ignacio Alvarez-Hamelin

Understanding the causes and effects of network structural features is a key task in deciphering complex systems. In this context, the property of network nestedness has aroused a fair amount of interest as regards ecological networks.…

物理与社会 · 物理学 2013-09-23 Samuel Johnson , Virginia Dominguez-Garcia , Miguel A. Munoz

Degree distribution of nodes, especially a power law degree distribution, has been regarded as one of the most significant structural characteristics of social and information networks. Node degree, however, only discloses the first-order…

社会与信息网络 · 计算机科学 2010-09-23 Ajay Sridharan , Yong Gao , Kui Wu , James Nastos

Simple nonlinear dynamical systems with multiple stable stationary states are often taken as models for switchlike biological systems. This paper considers the interaction of multiple such simple multistable systems when they are embedded…

定量方法 · 定量生物学 2008-04-10 Dennis Cates Wylie

This study investigates the prevalence and implications of nestedness within primate social networks, examining its relationship with cognitive and structural factors. We analysed data from 51 primate groups across 21 species, employing…

Plant-pollinator mutualistic networks are asymmetric in their interactions: specialist plants are pollinated by generalist animals, while generalist plants are pollinated by a broad involving specialists and generalists. It has been…

种群与进化 · 定量生物学 2015-05-20 Guillermo Abramson , Claudia A. Trejo Soto , Leonardo Oña

Bipartite networks provide an insightful representation of many systems, ranging from mutualistic networks of species interactions to investment networks in finance. The analysis of their topological structures has revealed the ubiquitous…

物理与社会 · 物理学 2018-07-20 Mika J. Straka , Guido Caldarelli , Tiziano Squartini , Fabio Saracco

Nestedness has traditionally been used to detect assembly patterns in meta-communities and networks of interacting species. Attempts have also been made to uncover nested structures in international trade, typically represented as bipartite…

Community ecologists are principally occupied with the proposition that natural assemblages of species exhibit orderliness and with identifying its causes. Plant-pollinator networks exhibit a variety of orderly properties, one of which is…

种群与进化 · 定量生物学 2011-07-07 James E. Cresswell , Laura Hernandez

We study collaboration networks in terms of evolving, self-organizing bipartite graph models. We propose a model of a growing network, which combines preferential edge attachment with the bipartite structure, generic for collaboration…

统计力学 · 物理学 2009-11-10 Jose J. Ramasco , S. N. Dorogovtsev , Romualdo Pastor-Satorras

The need to harmonise apparently irreconcilable arrangements in an ecosystem --nestedness and segregation-- has triggered so far different strategies. Methodological refinements, or the inclusion of behavioural preferences to the network…

There is an abundance of literature on complex networks describing a variety of relationships among units in social, biological, and technological systems. Such networks, consisting of interconnected nodes, are often self-organized,…

适应与自组织系统 · 物理学 2011-08-18 Paul J. Laurienti , Karen E. Joyce , Qawi K. Telesford , Jonathan H. Burdette , Satoru Hayasaka

Within the last fifteen years, network theory has been successfully applied both to natural sciences and to socioeconomic disciplines. In particular, bipartite networks have been recognized to provide a particularly insightful…

物理与社会 · 物理学 2015-12-07 Fabio Saracco , Riccardo Di Clemente , Andrea Gabrielli , Tiziano Squartini

We use a generalised version of the individual-based Tangled Nature model of evolutionary ecology to study the relationship between ecosystem structure and evolutionary history. Our evolved model ecosystems typically exhibit interaction…

种群与进化 · 定量生物学 2007-05-23 Simon Laird , Henrik Jeldtoft Jensen

Collaboration networks are studied as an example of growing bipartite networks. These have been previously observed to have structure such as positive correlations between nearest-neighbour degrees. However, a detailed understanding of the…

物理与社会 · 物理学 2009-11-11 Matti Peltomaki , Mikko Alava

A new model ecosystem consisting of many interacting species is introduced. The species are connected through a random matrix with a given connectivity. It is shown that the system is organized close to a boundary of marginal stability in…

adap-org · 物理学 2007-05-23 Ricard V. Sole , David Alonso , Alan McKane

What is the underlying mechanism leading to power-law degree distributions of many natural and artificial networks is still at issue. We consider that scale-free networks emerges from self-organizing process, and such a evolving model is…

统计力学 · 物理学 2007-05-23 Gang Yan , Tao Zhou , Ying-Di Jin , Zhong-Qian Fu

In this paper we investigate networks whose evolution is governed by the interaction of a random assembly process and an optimization process. In the first process, new nodes are added one at a time and form connections to randomly selected…

无序系统与神经网络 · 物理学 2011-05-16 Markus Brede