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相关论文: Universality of Long-Range Correlations in Expansi…

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This work is devoted to the study of the scaling, and the consequent power-law behavior, of the correlation function in a mutation-replication model known as the expansion-modification system. The latter is a biology inspired random…

概率论 · 数学 2015-06-04 Raúl Salgado-García , Edgardo Ugalde

Quantum quenches to or near criticality give rise to the phenomenon of \textit{aging}, manifested by glassy-like dynamics at short times and far from equilibrium. The recent surge of interest in the dynamics of quantum many-body systems has…

统计力学 · 物理学 2021-08-10 Jad C. Halimeh , Mohammad F. Maghrebi

When two populations of "particles" move in opposite directions, like oppositely charged colloids under an electric field or intersecting flows of pedestrians, they can move collectively, forming lanes along their direction of motion. The…

统计力学 · 物理学 2017-03-16 Alexis Poncet , Olivier Bénichou , Vincent Démery , Gleb Oshanin

In this paper, we study the mean-field dynamics of a general class of many-body systems with stochastically fluctuating interactions. Our findings reveal a universal algebraic decay of the order parameter $m(t)\sim t^{-\chi}$ with an…

强关联电子 · 物理学 2022-02-04 Zi Cai

The so called long range correlation properties of DNA sequences are studied using the variance analyses of the density distribution of a single or a group of nucleotides in a model independent way. This new method which was suggested…

生物物理 · 物理学 2007-05-23 A. K. Mohanty , A. V. S. S. Narayana Rao

We extend the notions of multipole and subsystem symmetries to more general {\it spatially modulated} symmetries. We uncover two instances with exponential and (quasi)-periodic modulations, and provide simple microscopic models in one, two…

统计力学 · 物理学 2021-10-19 Pablo Sala , Julius Lehmann , Tibor Rakovszky , Frank Pollmann

We study the history-dependent percolation in two dimensions, which evolves in generations from standard bond-percolation configurations through iteratively removing occupied bonds. Extensive simulations are performed for various…

统计力学 · 物理学 2020-11-23 Minghui Hu , Yanan Sun , Dali Wang , Jian-Ping Lv , Youjin Deng

Textual analysis of typical microbial genomes reveals that they have the statistical characteristics of a DNA sequence of a much shorter length. This peculiar property supports an evolutionary model in which a genome evolves by random…

生物物理 · 物理学 2009-11-07 L. C. Hsieh , L. F. Luo , F. M. Ji , H. C. Lee

A directed percolation process with two symmetric particle species exhibiting exclusion in one dimension is investigated numerically. It is shown that if the species are coupled by branching ($A\to AB$, $B\to BA$) a continuous phase…

统计力学 · 物理学 2009-10-31 Geza Odor

We investigate the universality in collisionless nonlinear dynamics of a codimension-two bifurcation where two eigenvalues collide at the origin, and two lines of continuous bifurcation and discontinuous jump meet. Through linear analysis…

斑图形成与孤子 · 物理学 2025-03-05 Yoshiyuki Y. Yamaguchi , Julien Barré

Constraints on changes in expression levels across all cell components imposed by the steady growth of cells have recently been discussed both experimentally and theoretically. By assuming a small environmental perturbation and considering…

种群与进化 · 定量生物学 2018-04-18 Chikara Furusawa , Kunihiko Kaneko

We report on universality in boundary domain growth in cluster aggregation in the limit of maximum concentration. Maximal concentration means that the diffusivity of the clusters is effectively zero and, instead, clusters merge successively…

We calculate the mutual information function for each of the 24 chromosomes in the human genome. The same correlation pattern is observed regardless the individual functional features of each chromosome. Moreover, correlations of different…

基因组学 · 定量生物学 2007-05-23 R. Mansilla , N. Del Castillo , T. Govezensky , P. Miramontes , M. Jose , G. Coch

The nature of statistics, statistical mechanics and consequently the thermodynamics of stochastic systems is largely determined by how the number of states $W(N)$ depends on the size $N$ of the system. Here we propose a scaling expansion of…

统计力学 · 物理学 2018-09-13 Jan Korbel , Rudolf Hanel , Stefan Thurner

Self-organization through noisy interactions is ubiquitous across physics, mathematics, and machine learning, yet how long-range structure emerges from local noisy dynamics remains poorly understood. Here, we investigate three paradigmatic…

软凝聚态物质 · 物理学 2026-03-31 Satyam Anand , Guanming Zhang , Stefano Martiniani

We model long range correlations of nucleotides in the human DNA sequence using the long range one dimensional Ising model. We show that for distances between $10^3$ and $10^6$ bp the correlations show an universal behaviour and may be…

其他定量生物学 · 定量生物学 2015-05-13 A. Colliva , R. Pellegrini , A. Testori , M. Caselle

This work is designed to overview our present knowledge about universality classes occurring in nonequilibrium systems defined on regular lattices. In the first section I summarize the most important critical exponents, relations and the…

统计力学 · 物理学 2016-08-31 Geza Odor

Growth patterns of complex systems predict how they change in sizes, numbers, masses, etc. Understanding growth is important, especially for many biological, ecological, urban, and socioeconomic systems. One noteworthy growth behavior is…

物理与社会 · 物理学 2022-06-07 Jinkui Zhao

With the development of high throughput sequencing technology, it becomes possible to directly analyze mutation distribution in a genome-wide fashion, dissociating mutation rate measurements from the traditional underlying assumptions.…

基因组学 · 定量生物学 2015-05-14 D. Parkhomchuk , V. S. Amstislavskiy , A. Soldatov , V. Ogryzko

Motivated by novel results in the theory of correlated sequences, we analyze the dynamics of random walks with long-term memory (binary chains with long-range correlations). In our model, the probability for a unit bit in a binary string…

统计力学 · 物理学 2009-11-10 Shahar Hod , Uri Keshet