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A model of a finite cylindrical ion channel through a phospholipid membrane of width $L$ separating two electrolyte reservoirs is studied. Analytical solution of the Poisson equation is obtained for an arbitrary distribution of ions inside…

软凝聚态物质 · 物理学 2009-11-11 Yan Levin

We consider an anisotropically two-dimensional diffusion of a charged molecule (particle) through a large biological channel under an external voltage. The channel is modeled as a cylinder of three structure parameters: radius, length, and…

软凝聚态物质 · 物理学 2016-02-01 V. T. N. Huyen , Le Bin Ho , Vu Cong Lap , V. Lien Nguyen

The solution of the Poisson--Boltzmann equation for counterions confined between two charged plates is known analytically up to a constant, namely, the ion density in the middle of the channel. This quantity is relevant also because it…

计算物理 · 物理学 2018-09-06 Andrei Bazarenko , Marcello Sega

Translocation properties of ionic channels are investigated, on the basis of classical electrostatics, with an emphasis on asymptotic formulas for the potential and field associated with a point charge in the channel. Due to image charges…

软凝聚态物质 · 物理学 2007-05-23 Sofian Teber

In this paper we estimate the size of a measurable inclusion in terms of power measurements for a single applied boundary current. This problem arises in medical imaging for the screening of organs. For this kind of problem one has to deal…

偏微分方程分析 · 数学 2011-12-13 Elena Beretta , Elisa Francini , Sergio Vessella

We consider ion transport through protein ion channels in lipid membranes and water-filled nanopores in silicon films. It is known that, due to the large ratio of dielectric constants of water and the surrounding material, an ion placed…

软凝聚态物质 · 物理学 2009-11-11 J. Zhang , A. Kamenev , B. I. Shklovskii

The problem of wave packet tunneling from a parabolic potential well through a barrier represented by a power potential is considered in the case when the barrier height is much greater than the oscillator ground state energy, and the…

量子物理 · 物理学 2009-10-30 V. V. Dodonov , A. B. Klimov , V. I. Man'ko

We investigate a double-layer of penetrable ions near a charged wall. We find a new mechanism for charge reversal that occurs in the weak-coupling regime and, accordingly, the system is suitable for the mean-field analysis. The…

软凝聚态物质 · 物理学 2013-05-06 Derek Frydel , Yan Levin

New capacity upper bounds are presented for the discrete-time Poisson channel with no dark current and an average-power constraint. These bounds are a simple consequence of techniques developed for the seemingly unrelated problem of upper…

信息论 · 计算机科学 2018-07-23 Mahdi Cheraghchi , João Ribeiro

We revisit the classical problem of diffusion-limited ion transport to a membrane (or electrode) by considering the effects of charged side walls. Using simple mathematical models and numerical simulations, we identify three basic…

流体动力学 · 物理学 2015-05-30 E. Victoria Dydek , Boris Zaltzman , Isaak Rubinstein , D. S. Deng , Ali Mani , Martin Z. Bazant

We propose an iterative method for approximately computing the capacity of discrete memoryless channels, possibly under additional constraints on the input distribution. Based on duality of convex programming, we derive explicit upper and…

信息论 · 计算机科学 2015-04-06 Tobias Sutter , David Sutter , Peyman Mohajerin Esfahani , John Lygeros

In a previous paper we suggested that a macroscopic force field applied across a two-dimensional electron gas channel could induce a microscopic charge density wave as soon as the proper compressibility becomes negative, which happens at…

介观与纳米尺度物理 · 物理学 2020-11-24 Erica Hroblak , Mohammad Zarenia , Giovanni Vignale

Cellular electrophysiology is often modeled using the cable equations. The cable model can only be used when ionic concentration effects and three dimensional geometry effects are negligible. The Poisson model, in which the electrostatic…

神经元与认知 · 定量生物学 2009-01-27 Yoichiro Mori

We give an explicit formula for the membrane potential of cells in terms of the intracellular and extracellular ionic concentrations, and derive equations for the ionic currents that flow through channels, exchangers and electrogenic pumps.…

生物物理 · 物理学 2007-05-23 L. P. Endresen , K. Hall , J. S. Hoye , J. Myrheim

We present a closed description of the charge carrier injection process from a conductor into an insulator. Common injection models are based on single electron descriptions, being problematic especially once the amount of charge-carriers…

材料科学 · 物理学 2007-05-23 F. Neumann , Y. A. Genenko , C. Melzer , S. V. Yampolskii , H. von Seggern

We investigate the fundamental limits of reliable communication over multi-view channels, in which the channel output is comprised of a large number of independent noisy views of a transmitted symbol. We consider first the setting of…

信息论 · 计算机科学 2024-05-14 V. Arvind Rameshwar , Nir Weinberger

We discuss various models of ion transport through cell membrane channels. Recent experimental data shows that sizes of ion channels are compared to those of ions and that only few ions may be simultaneously in any single channel.…

亚细胞过程 · 定量生物学 2007-06-06 Jan Gomulkiewicz , Jacek Miekisz , Stanislaw Miekisz

Free energy barrier for entry of a charged polymer into a nanoscale channel by a driving electric field is studied theoretically and using molecular dynamics simulations. Dependence of the barrier height on the polymer length, the driving…

软凝聚态物质 · 物理学 2012-02-29 Narges Nikoofard , Hossein Fazli

A simple lower bound to the capacity of the discrete-time Poisson channel with average energy $\es$ is derived. The rate ${1/2}\log(1+\es)$ is shown to be the generalized mutual information of a modified minimum-distance decoder, when the…

信息论 · 计算机科学 2008-09-22 Alfonso Martinez

We derive improved and easily computable upper bounds on the capacity of the discrete-time Poisson channel under an average-power constraint and an arbitrary constant dark current term. This is accomplished by combining a general convex…

信息论 · 计算机科学 2020-11-03 Mahdi Cheraghchi , João Ribeiro
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