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A metric phylogenetic tree relating a collection of taxa induces weighted rooted triples and weighted quartets for all subsets of three and four taxa, respectively. New intertaxon distances are defined that can be calculated from these…

种群与进化 · 定量生物学 2020-02-12 Samaneh Yourdkhani , John A. Rhodes

Building on prior work that established Matrix Quasi-tree Theorems for special embedded graphs, in this paper, we develop a comprehensive theory applicable to all embedded graphs. We introduce symbolic skew-adjacency matrices and reduction…

组合数学 · 数学 2025-12-02 Qingying Deng , Xian'an Jin , Qi Yan , Yexiang Yan

Learning about the relationship between distance to landmarks and events and phenomena of interest is a multi-faceted problem, as it may require taking into account multiple dimensions, including: spatial position of landmarks, timing of…

应用统计 · 统计学 2024-09-11 Ines Levin

We construct a model based on social balance theory proposed by Fritz Heider to analyze the interpersonal network among social agents. The model of social balance theory provides us an interesting tool to see how a social group evolves to…

斑图形成与孤子 · 物理学 2007-05-23 Deni Khanafiah , Hokky Situngkir

By revisiting the Kirchhoff's Matrix-Tree Theorem, we give an exact formula for the number of spanning trees of a graph in terms of the quantum relative entropy between the maximally mixed state and another state specifically obtained from…

量子物理 · 物理学 2011-02-14 Vittorio Giovannetti , Simone Severini

Community structure is one of the key properties of complex networks and plays a crucial role in their topology and function. While an impressive amount of work has been done on the issue of community detection, very little attention has…

物理与社会 · 物理学 2010-09-17 Andrea Lancichinetti , Mikko Kivela , Jari Saramaki , Santo Fortunato

The tree-metric theorem provides a necessary and sufficient condition for a dissimilarity matrix to be a tree metric, and has served as the foundation for numerous distance-based reconstruction methods in phylogenetics. Our main result is…

组合数学 · 数学 2007-05-23 Lior Pachter , David E Speyer

Much information about a graph can be obtained by studying its spanning trees. On the other hand, a graph can be regarded as a 1-dimensional cell complex, raising the question of developing a theory of trees in higher dimension. As observed…

组合数学 · 数学 2015-06-24 Art M. Duval , Caroline J. Klivans , Jeremy L. Martin

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

社会与信息网络 · 计算机科学 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

Visualization is a powerful paradigm for exploratory data analysis. Visualizing large graphs, however, often results in a meaningless hairball. In this paper, we propose a different approach that helps the user adaptively explore large…

We study the asymptotic expansion of the determinant of the graph Laplacian associated to discretizations of a half-translation surface endowed with a flat unitary vector bundle. By doing so, over the discretizations, we relate the…

概率论 · 数学 2026-03-25 Siarhei Finski

Mutual visibility in graphs provides a framework for analysing how vertices can observe one another along shortest paths free of internal obstructions. The visibility polynomial, which enumerates mutual-visibility sets of all orders, has…

组合数学 · 数学 2026-04-10 Tonny K B , Shikhi M

By the Grid Minor Theorem of Robertson and Seymour, every graph of sufficiently large tree-width contains a large grid as a minor. Tree-width may therefore be regarded as a measure of 'grid-likeness' of a graph. The grid contains a long…

组合数学 · 数学 2018-02-15 Daniel Weißauer

In this paper, we investigate the structural properties of trees and bipartite graphs through the lens of topological indices and combinatorial graph theory. We focus on the First and Second Hyper-Zagreb indices, $HM_1(G)$ and $HM_2(G)$,…

组合数学 · 数学 2025-08-21 Jasem Hamoud

In this series, we introduce and investigate the concept of connectoids, which captures the connectivity structure of various discrete objects such as undirected graphs, directed graphs, bidirected graphs, hypergraphs and finitary matroids.…

组合数学 · 数学 2026-05-21 Nathan Bowler , Florian Reich

Social networks are organized into communities with dense internal connections, giving rise to high values of the clustering coefficient. In addition, these networks have been observed to be assortative, i.e. highly connected vertices tend…

物理与社会 · 物理学 2016-09-08 R. Toivonen , J. -P. Onnela , J. Saramäki , J. Hyvönen , K. Kaski

Minimal spanning trees on infinite vertex sets are investigated. A criterion for minimality of a spanning tree having a finite length is obtained, which generalizes the corresponding classical result for finite sets. It is given an analytic…

度量几何 · 数学 2014-03-18 A. O. Ivanov , A. A. Tuzhilin

It is known that there is an alternative characterization of characteristic vertices for trees with positive weights on their edges via Perron values and Perron branches. Moreover, the algebraic connectivity of a tree with positive edge…

组合数学 · 数学 2022-03-18 Swetha Ganesh , Sumit Mohanty

For random matrices with tree-like structure there exists a recursive relation for the local Green functions whose solution permits to find directly many important quantities in the limit of infinite matrix dimensions. The purpose of this…

无序系统与神经网络 · 物理学 2015-06-17 E. Bogomolny , O. Giraud

The {\em atom-bond connectivity (ABC) index} is one of the recently most investigated degree-based molecular structure descriptors, that have applications in chemistry. For a graph $G$, the ABC index is defined as $\sum_{uv\in…

离散数学 · 计算机科学 2013-10-07 Darko Dimitrov