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This paper deals with parameter estimation in pair hidden Markov models (pair-HMMs). We first provide a rigorous formalism for these models and discuss possible definitions of likelihoods. The model being biologically motivated, some…

统计理论 · 数学 2010-12-09 Ana Arribas-Gil , Elisabeth Gassiat , Catherine Matias

The prevalence of missing values in data science poses a substantial risk to any further analyses. Despite a wealth of research, principled nonparametric methods to deal with general non-monotone missingness are still scarce. Instead,…

机器学习 · 统计学 2026-05-04 Gitte Kremling , Jeffrey Näf , Johannes Lederer

Many real-world networks are known to exhibit facts that counter our knowledge prescribed by the theories on network creation and communication patterns. A common prerequisite in network analysis is that information on nodes and links will…

物理与社会 · 物理学 2018-04-03 Guy Kelman , Eran Manes , Marco Lamieri , David Breé

Semi-supervised learning (SSL) approaches have been successfully applied in a wide range of engineering and scientific fields. This paper investigates the generative model framework with a missingness mechanism for unclassified…

机器学习 · 统计学 2024-01-01 Ziyang Lyu

Integrating non-probability samples into finite-population inference typically requires modeling unknown selection probabilities under a missing-at-random (MAR) assumption that is difficult to verify. We propose a design-based alternative…

统计方法学 · 统计学 2026-05-08 Andrius Čiginas , Ieva Burakauskaitė , Jae Kwang Kim

Missing values arise in most real-world data sets due to the aggregation of multiple sources and intrinsically missing information (sensor failure, unanswered questions in surveys...). In fact, the very nature of missing values usually…

机器学习 · 统计学 2022-02-04 Alexis Ayme , Claire Boyer , Aymeric Dieuleveut , Erwan Scornet

In this article, we investigate the robust optimal design problem for the prediction of response when the fitted regression models are only approximately specified, and observations might be missing completely at random. The intuitive idea…

统计方法学 · 统计学 2022-10-19 Rui Hu , Ion Bica , Zhichun Zhai

A useful technique for analyzing incomplete tables is to model the missing data mechanisms of the variables using log-linear models. In this paper, we use log-linear parametrization and propose estimation methods for arbitrary three-way and…

统计方法学 · 统计学 2019-10-29 S. Ghosh , P. Vellaisamy

Decision trees are a popular family of models due to their attractive properties such as interpretability and ability to handle heterogeneous data. Concurrently, missing data is a prevalent occurrence that hinders performance of machine…

机器学习 · 计算机科学 2020-07-01 Pasha Khosravi , Antonio Vergari , YooJung Choi , Yitao Liang , Guy Van den Broeck

Multiple imputation (MI) has become popular for analyses with missing data in medical research. The standard implementation of MI is based on the assumption of data being missing at random (MAR). However, for missing data generated by…

统计方法学 · 统计学 2019-01-03 Tra My Pham , James R Carpenter , Tim P Morris , Angela M Wood , Irene Petersen

We present an approach to inform decisions about nonresponse follow-up sampling. The basic idea is (i) to create completed samples by imputing nonrespondents' data under various assumptions about the nonresponse mechanisms, (ii) take…

统计方法学 · 统计学 2022-09-16 Thais Paiva , Jerry Reiter

Widely used methods for analyzing missing data can be biased in small samples. To understand these biases, we evaluate in detail the situation where a small univariate normal sample, with values missing at random, is analyzed using either…

统计理论 · 数学 2017-03-27 Paul T. von Hippel

This paper studies the open problem of conformalized entry prediction in a row/column-exchangeable matrix. The matrix setting presents novel and unique challenges, but there exists little work on this interesting topic. We meticulously…

机器学习 · 计算机科学 2023-06-07 Meijia Shao , Yuan Zhang

Ranked data appear in many different applications, including voting and consumer surveys. There often exhibits a situation in which data are partially ranked. Partially ranked data is thought of as missing data. This paper addresses…

统计方法学 · 统计学 2019-03-01 Kento Nakamura , Keisuke Yano , Fumiyasu Komaki

Finite mixture distributions arise in sampling a heterogeneous population. Data drawn from such a population will exhibit extra variability relative to any single subpopulation. Statistical models based on finite mixtures can assist in the…

统计方法学 · 统计学 2024-01-19 Andrew M. Raim , Nagaraj K. Neerchal , Jorge G. Morel

Missing data are inevitable in clinical trials, and trials that produce categorical ordinal responses are not exempted from this. Typically, missing values in the data occur due to different missing mechanisms, such as missing completely at…

统计方法学 · 统计学 2025-05-09 Arnab Kumar Maity , Huaming Tan , Vivek Pradhan , Soutir Bandyopadhyay

Missing values are unavoidable in many applications of machine learning and present challenges both during training and at test time. When variables are missing in recurring patterns, fitting separate pattern submodels have been proposed as…

机器学习 · 计算机科学 2023-11-27 Lena Stempfle , Ashkan Panahi , Fredrik D. Johansson

Given data on the choices made by consumers for different offer sets, a key challenge is to develop parsimonious models that describe and predict consumer choice behavior while being amenable to prescriptive tasks such as pricing and…

机器学习 · 统计学 2025-04-15 Yanqiu Ruan , Xiaobo Li , Karthyek Murthy , Karthik Natarajan

Missing data is a pervasive problem in epidemiology, with multiple imputation (MI) a commonly used analysis method. MI is valid when data are missing at random (MAR). However, definitions of MAR with multiple incomplete variables are not…

统计方法学 · 统计学 2025-04-14 Paul Madley-Dowd , Rachael A. Hughes , Maya B. Mathur , Jon Heron , Kate Tilling

Targeted Maximum Likelihood Estimation (TMLE) is increasingly used for doubly robust causal inference, but how missing data should be handled when using TMLE with data-adaptive approaches is unclear. Based on the Victorian Adolescent Health…