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By means of molecular dynamics simulations, we study the stationary points of the potential energy in a Lennard-Jones liquid, giving a purely geometric characterization of the energy landscape of the system. We find a linear relation…

We report on numerical procedures for, and preliminary results on the search for, tunnelling centres in Lennard-Jones clusters, seen as simple model systems of glasses. Several of the double-well potentials identified are good candidates to…

无序系统与神经网络 · 物理学 2007-05-23 G. Daldoss , O. Pilla , G. Viliani

Potential energy landscapes can be represented as a network of minima linked by transition states. The community structure of such networks has been obtained for a series of small Lennard-Jones clusters. This community structure is compared…

统计力学 · 物理学 2007-05-23 Claire P. Massen , Jonathan P. K. Doye

Though the existence of two-level systems (TLS) is widely accepted to explain low temperature anomalies in the sound absorption, heat capacity, thermal conductivity and other quantities, an exact description of their microscopic nature is…

材料科学 · 物理学 2009-11-10 J. Reinisch , A. Heuer

The properties of higher-index saddle points have been invoked in recent theories of the dynamics of supercooled liquids. Here we examine in detail a mapping of configurations to saddle points using minimization of $|\nabla E|^2$, which has…

无序系统与神经网络 · 物理学 2007-05-23 Jonathan P. K. Doye , David J. Wales

We present a class of simple algorithms that allows to find the reaction path in systems with a complex potential energy landscape. The approach does not need any knowledge on the product state and does not require the calculation of any…

无序系统与神经网络 · 物理学 2018-02-28 Silvia Bonfanti , Walter Kob

We formally extend the energy landscape approach for the thermodynamics of liquids to account for saddle points. By considering the extensive nature of macroscopic potential energies, we derive the scaling behavior of saddles with system…

软凝聚态物质 · 物理学 2009-11-10 M. S. Shell , P. G. Debenedetti , A. Z. Panagiotopoulos

The potential energy surface (PES) of Lennard-Jones clusters is investigated using the activation-relaxation technique (ART). This method defines events in the configurational energy landscape as a two-step process: (a) a configuration is…

材料科学 · 物理学 2009-10-31 R. Malek , N. Mousseau

By dividing potential energy landscapes into basins of attractions surrounding minima and linking those basins that are connected by transition state valleys, a network description of energy landscapes naturally arises. These networks are…

统计力学 · 物理学 2007-05-23 Jonathan P. K. Doye , Claire P. Massen

We study the energy-landscape network of Lennard-Jones clusters as a model of a glass forming system. We find the stable basins and the first order saddles connecting them, and identify them with the network nodes and links, respectively.…

软凝聚态物质 · 物理学 2009-03-14 Shai Carmi , Shlomo Havlin , Chaoming Song , Kun Wang , Hernan A. Makse

We present a new theoretical framework for modelling the fusion process of Lennard-Jones (LJ) clusters. Starting from the initial tetrahedral cluster configuration, adding new atoms to the system and absorbing its energy at each step, we…

原子与分子团簇 · 物理学 2009-09-29 Ilia A. Solovyov , Andrey V. Solovyov , Walter Greiner

Theoretical design of global optimization algorithms can profitably utilize recent statistical mechanical treatments of potential energy surfaces (PES's). Here we analyze the basin-hopping algorithm to explain its success in locating the…

统计力学 · 物理学 2007-05-23 Jonathan Doye , David Wales , Mark Miller

The role of the potential energy landscape in determining the relaxation dynamics of model clusters is studied using a master equation. Two types of energy landscape are examined: a single funnel, as exemplified by 13-atom Morse clusters,…

统计力学 · 物理学 2009-10-31 Mark A. Miller , Jonathan P. K. Doye , David J. Wales

Molecular dynamics simulations are used to generate an ensemble of saddles of the potential energy of a Lennard-Jones liquid. Classifying all extrema by their potential energy u and number of unstable directions k, a well defined relation…

Given discrete degrees of freedom (spins) on a graph interacting via an energy function, what can be said about the energy local minima and associated inherent structures? Using the lid algorithm in the context of a spin glass energy…

无序系统与神经网络 · 物理学 2009-11-11 Z. Burda , A. Krzywicki , O. C. Martin , Z. Tabor

In order to efficiently explore the chemical space of all possible small molecules, a common approach is to compress the dimension of the system to facilitate downstream machine learning tasks. Towards this end, we present a data driven…

生物大分子 · 定量生物学 2024-01-23 Paula Mercurio , Di Liu

The 38-atom Lennard-Jones cluster has a paradigmatic double-funnel energy landscape. One funnel ends in the global minimum, a face-centred-cubic (fcc) truncated octahedron. At the bottom of the other funnel is the second lowest energy…

凝聚态物理 · 物理学 2007-05-23 Jonathan Doye , Mark Miller , David Wales

The relation between saddle points of the potential of a classical many-particle system and the analyticity properties of its thermodynamic functions is studied. For finite systems, each saddle point is found to cause a nonanalyticity in…

统计力学 · 物理学 2011-11-09 Michael Kastner , Oliver Schnetz , Steffen Schreiber

According to the mean-field glass theory, the (free) energy landscape of disordered systems is hierarchical and ultrametric if they belong to the full-replica-symmetry-breaking universality class. However, examining this theoretical picture…

软凝聚态物质 · 物理学 2025-12-23 Shuonan Wu , Yuchen Xie , Deng Pan , Lei Zhang , Yuliang Jin

It is analyzed whether the potential energy landscape of a glass-forming system can be effectively mapped on a random model which is described in statistical terms. For this purpose we generalize the simple trap model of Bouchaud and…

无序系统与神经网络 · 物理学 2009-11-11 A. Heuer , B. Doliwa , A. Saksaengwijit
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