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相关论文: Finite-size Domains in a Membrane with Two-state A…

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We consider the statistics of the areas enclosed by domain boundaries (`hulls') during the curvature-driven coarsening dynamics of a two-dimensional nonconserved scalar field from a disordered initial state. We show that the number of hulls…

统计力学 · 物理学 2007-06-13 Jeferson J. Arenzon , Alan J. Bray , Leticia F. Cugliandolo , Alberto Sicilia

Active motions of a biological membrane can be induced by non-thermal fluctuations that occur in the outer environment of the membrane. We discuss the dynamics of a membrane interacting hydrodynamically with an active wall that exerts…

软凝聚态物质 · 物理学 2016-05-18 Kento Yasuda , Shigeyuki Komura , Ryuichi Okamoto

The formation of microdomains, also called rafts, in biomembranes can be attributed to the surface tension of the membrane. In order to model this phenomenon, a model involving a coupling between the local composition and the local…

偏微分方程分析 · 数学 2016-06-29 Irene Fonseca , Gurgen Hayrapetyan , Giovanni Leoni , Barbara Zwicknagl

Proteins and nucleic acids can spontaneously self-assemble into membraneless droplet-like compartments, both in vitro and in vivo. A key component of these droplets are multi-valent proteins that possess several adhesive domains with…

生物大分子 · 定量生物学 2020-01-10 Srivastav Ranganathan , Eugene Shakhnovich

We provide a comprehensive view of various phase transitions in random $K$-satisfiability problems solved by stochastic-local-search algorithms. In particular, we focus on the finite-size scaling (FSS) exponent, which is mathematically…

统计力学 · 物理学 2015-03-17 Sang Hoon Lee , Meesoon Ha , Chanil Jeon , Hawoong Jeong

We use a modified Shan-Chen, noiseless lattice-BGK model for binary immiscible, incompressible, athermal fluids in three dimensions to simulate the coarsening of domains following a deep quench below the spinodal point from a symmetric and…

软凝聚态物质 · 物理学 2009-11-10 Nélido González-Segredo , Maziar Nekovee , Peter V. Coveney

Motivated by experimental observations of patterning at the leading edge of motile eukaryotic cells, we introduce a general model for the dynamics of nearly-flat fluid membranes driven from within by an ensemble of activators. We include,…

统计力学 · 物理学 2022-02-09 Francesco Cagnetta , Viktor Skultety , Martin R. Evans , Davide Marenduzzo

Multicomponent lipid mixtures exhibit complex phase behavior, including coexistence of nanoscopic fluid phases in ternary mixtures mimicking the composition of the outer leaflet of mammalian plasma membrane. The physical mechanisms…

软凝聚态物质 · 物理学 2011-06-01 Frederick A. Heberle , Gerald W. Feigenson

The finite-size effects prominent in zero-range processes exhibiting a condensation transition are studied by using continuous-time Monte Carlo simulations. We observe that, well above the thermodynamic critical point, both static and…

统计力学 · 物理学 2010-09-21 Janne Juntunen , Otto Pulkkinen , Juha Merikoski

We consider the lateral diffusion of a protein interacting with the curvature of the membrane. The interaction energy is minimized if the particle is at a membrane position with a certain curvature that agrees with the spontaneous curvature…

软凝聚态物质 · 物理学 2008-12-10 Stefan M. Leitenberger , Ellen Reister-Gottfried , Udo Seifert

Conservative and non-conservative phase-field models are considered for the numerical simulation of lateral phase separation and coarsening in biological membranes. An unfitted finite element method is devised for these models to allow for…

数值分析 · 数学 2019-01-08 Vladimir Yushutin , Annalisa Quaini , Sheereen Majd , Maxim Olshanskii

Biomembranes and vesicles consisting of multiple phases can attain a multitude of shapes, undergoing complex shape transitions. We study a Cahn--Hilliard model on an evolving hypersurface coupled to Navier--Stokes equations on the surface…

数值分析 · 数学 2019-11-01 John W. Barrett , Harald Garcke , Robert Nürnberg

We study, by means of mean field calculations and Monte Carlo simulations of a lattice-gas model, the distribution of adhesion sites of a bilayer membrane and a supporting flat surface. Our model accounts for the many-body character of the…

软凝聚态物质 · 物理学 2011-10-21 Noam Weil , Oded Farago

Quenched or frozen-in structural disorder is ubiquitous in real experimental systems. Much of the progress is achieved in understanding the phase separation of such systems using the diffusion-driven coarsening in Ising model with quenched…

软凝聚态物质 · 物理学 2023-08-15 Rounak Bhattacharyya , Bhaskar Sen Gupta

Collective cell motions underlie structure formation during embryonic development. Tissues exhibit emergent multicellular characteristics such as jamming, rigidity transitions, and glassy dynamics, but there remain questions about how those…

生物物理 · 物理学 2023-12-13 Evan Thomas , Sevan Hopyan

The biological membrane, which compartmentalizes the cell and its organelles, exhibit wide variety of macroscopic shapes of varying morphology and topology. A systematic understanding of the relation of membrane shapes to composition,…

生物物理 · 物理学 2011-09-23 N. Ramakrishnan , P. B. Sunil Kumar , John H. Ipsen

We consider an "impurity" with a spin degree of freedom coupled to a finite reservoir of non-interacting electrons, a system which may be realized by either a true impurity in a metallic nano-particle or a small quantum dot coupled to a…

介观与纳米尺度物理 · 物理学 2009-08-06 R. K. Kaul , D. Ullmo , G. Zarand , S. Chandrasekharan , H. U. Baranger

Collective behavior of proteins on biomembranes is usually studied within the spontaneous curvature model. Here we consider an alternative phenomenological approach, which accounts consistently for partial ordering of proteins as well as…

软凝聚态物质 · 物理学 2014-09-03 O. V. Manyuhina

Curvature-inducing proteins containing a Bin/Amphiphysin/Rvs domain often have intrinsically disordered domains. Recent experiments have shown that these disordered chains enhance curvature sensing and generation. Here, we report on the…

软凝聚态物质 · 物理学 2022-07-20 Hiroshi Noguchi

The adhesion dynamics of a membrane confined between two permeable walls is studied using a two-dimensional hydrodynamic model. The membrane morphology decomposes into adhesion patches on the upper and the lower walls and obeys a nonlinear…

软凝聚态物质 · 物理学 2014-09-16 Thomas Le Goff , Paolo Politi , Olivier Pierre-Louis