中文
相关论文

相关论文: Reply to a revised comment on "Why is the DNA dena…

200 篇论文

A methodology is given to test the QCD $N_f$=2 chiral transition, presently conjectured to be second order. Scaling forms for the correlation length, susceptibilities and equation of state are given which account for finite lattice spacing.…

高能物理 - 唯象学 · 物理学 2015-06-25 Arjun Berera

The dynamics of loops at the DNA denaturation transition is studied. A scaling argument is used to evaluate the asymptotic behavior of the autocorrelation function of the state of complementary bases (either open or closed). The long-time…

统计力学 · 物理学 2008-07-03 Amir Bar , Yariv Kafri , David Mukamel

We derive scaling relations for the extension statistics and the confinement free energy for a semi-flexible polymer confined to a channel with a rectangular cross-section. Our motivation are recent numerical results [Gupta {\em et al.},…

软凝聚态物质 · 物理学 2015-05-19 E. Werner , B. Mehlig

Recently Garel, Monthus and Orland (Europhys. Lett. v 55, 132 (2001)) considered a model of DNA denaturation in which excluded volume effects within each strand are neglected, while mutual avoidance is included. Using an approximate scheme…

统计力学 · 物理学 2016-08-31 Marco Baiesi , Enrico Carlon , Enzo Orlandini , Attilio L. Stella

By means of the density matrix renormalization group technique, the scaling relation of the fidelity susceptibility proposed recently is verified for the spin-one XXZ spin chain with an on-site anisotropic term. Moreover, from the results…

量子物理 · 物理学 2008-01-14 Yu-Chin Tzeng , Min-Fong Yang

The denaturation transition which takes place in circular DNA is analyzed by extending the Poland-Scheraga model to include the winding degrees of freedom. We consider the case of a homopolymer whereby the winding number of the double…

统计力学 · 物理学 2011-11-22 Amir Bar , Alkan Kabakçıoğlu , David Mukamel

We consider the nonequilibrium time evolution of the transverse magnetization in the critical Ising and $XX$ quantum chains. For some inhomogeneously magnetized initial states we derive analytically the transverse magnetization profiles and…

统计力学 · 物理学 2009-11-07 Dragi Karevski

The study of QCD with two light dynamical fermions is of fundamental importance to understand the mechanism of color confinement. We present results of a numerical investigation on the order of the chiral phase transition with $N_f = 2$ by…

高能物理 - 格点 · 物理学 2008-11-26 M. D'Elia , A. Di Giacomo , C. Pica

We use a statistical mechanical model to study nonthermal denaturation of DNA in the presence of protein-mediated loops. We find that looping proteins which randomly link DNA bases located at a distance along the chain could cause a…

软凝聚态物质 · 物理学 2009-12-22 K. G. Petrosyan , Chin-Kun Hu

We compare results of previous simulations of a simple model of DNA denaturation to the predictions of the Poland-Scheraga model. Concentrating on the critical region of the latter model we calculate both thermodynamic quantities and the…

统计力学 · 物理学 2007-05-23 Lothar Schäfer

We discuss the nature of the two-stage percolation transition on the enhanced binary tree in order to explain the disagreement in the estimation of the second transition probability between the one in our recent paper (J. Phys. A:Math.…

统计力学 · 物理学 2009-11-06 Tomoaki Nogawa , Takehisa Hasegawa

Zheng [Phys. Rev. E {\bf 61}, 153 (2000), cond-mat/9909324] claims that phase ordering dynamics in the microcanonical $\phi^4$ model displays unusual scaling laws. We show here, performing more careful numerical investigations, that Zheng…

统计力学 · 物理学 2009-11-07 Julien Kockelkoren , Hugues Chaté

We study XY and dimerized XX spin-1/2 chains with random exchange couplings by analytical and numerical methods and scaling considerations. We extend previous investigations to dynamical properties, to surface quantities and operator…

无序系统与神经网络 · 物理学 2009-10-31 F. Igloi , R. Juhasz , H. Rieger

We recently proposed a dynamical mesoscopic model for DNA, which is based, like statistical ones, on site-dependent finite stacking and pairing enthalpies. In the present article, we first describe how the parameters of this model are…

生物物理 · 物理学 2009-01-14 Marc Joyeux , Ana-Maria Florescu

Here we give further evidences to support our scaling relation described in our previous paper [cond-mat/0006459, Phys. Rev. Lett. Vol.85, pp.1238 (2000)].

软凝聚态物质 · 物理学 2016-08-16 Chi-Hang Lam , Viktor K. Horváth

In the 1960's, four famous scaling relations were developed which relate the six standard critical exponents describing continuous phase transitions in the thermodynamic limit of statistical physics models. They are well understood at a…

统计力学 · 物理学 2024-04-16 Ralph Kenna , Bertrand Berche

We generalize the Poland-Scheraga model to consider DNA denaturation in the presence of an external stretching force. We demonstrate the existence of a force-induced DNA denaturation transition and obtain the temperature-force phase…

软凝聚态物质 · 物理学 2009-11-13 Andreas Hanke , Martha G. Ochoa , Ralf Metzler

Motivated by the idea of entanglement loss along Renormalization Group flows, analytical majorization relations are proven for the ground state of (1+1)-dimensional conformal field theories. For any of these theories, majorization is proven…

量子物理 · 物理学 2014-11-18 Roman Orus

The possibility of having a delocalization transition in the 1D de Moura-Lyra class of models (having a power-spectrum $\propto q^{-\alpha})$ has been the object of a long standing discussion in the literature, filled with ambiguities. In…

无序系统与神经网络 · 物理学 2020-03-12 J. P. Santos Pires , N. A. Khan , J. M. Viana Parente Lopes , J. M. B. Lopes dos Santos

Finite size scaling for a first order phase transition where a continuous symmetry is broken is developed using an approximation of Gaussian probability distributions with a phenomenological "degeneracy" factor included. Predictions are…

计算物理 · 物理学 2019-03-27 Jiahao Xu , Shan-Ho Tsai , D. P. Landau , K. Binder