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The correlation matrix is a central representation of functional brain networks in neuroimaging. Traditional analyses often treat pairwise interactions independently in a Euclidean setting, overlooking the intrinsic geometry of correlation…

机器学习 · 统计学 2025-04-10 Kisung You , Yelim Lee , Hae-Jeong Park

Artificial intelligence for scientific discovery has recently generated significant interest within the machine learning and scientific communities, particularly in the domains of chemistry, biology, and material discovery. For these…

The encoding of input parameters is one of the fundamental building blocks of neural network algorithms. Its goal is to map the input data to a higher-dimensional space, typically supported by trained feature vectors. The mapping is crucial…

图形学 · 计算机科学 2025-07-29 Jakub Bokšanský , Daniel Meister , Carsten Benthin

Principal component analysis (PCA) is a widespread technique for data analysis that relies on the covariance-correlation matrix of the analyzed data. However to properly work with high-dimensional data, PCA poses severe mathematical…

定量方法 · 定量生物学 2018-10-18 Luigi Leonardo Palese

Principal Component Analysis (PCA) minimizes the reconstruction error given a class of linear models of fixed component dimensionality. Probabilistic PCA adds a probabilistic structure by learning the probability distribution of the PCA…

机器学习 · 计算机科学 2022-09-20 Vanessa Böhm , Uroš Seljak

Geometric shape classification of vector polygons remains a challenging task in spatial analysis. Previous studies have primarily focused on deep learning approaches for rasterized vector polygons, while the study of discrete polygon…

计算机视觉与模式识别 · 计算机科学 2025-06-13 Zexian Huang , Kourosh Khoshelham , Martin Tomko

Principal Components Analysis (PCA) and Independent Component Analysis (ICA) are used to identify global patterns in solar and space data. PCA seeks orthogonal modes of the two-point correlation matrix constructed from a data set. It…

天体物理学 · 物理学 2009-11-13 A. C. Cadavid , J. K. Lawrence , A. Ruzmaikin

Symmetric positive definite (SPD) matrix has been demonstrated to be an effective feature descriptor in many scientific areas, as it can encode spatiotemporal statistics of the data adequately on a curved Riemannian manifold, i.e., SPD…

计算机视觉与模式识别 · 计算机科学 2023-11-29 Rui Wang , Xiao-Jun Wu , Hui Li , Josef Kittler

How to balance training accuracy and adversarial robustness has become a challenge since the birth of deep learning. Here, we introduce a geometry-aware deep learning framework that leverages layer-wise local training to sculpt the internal…

机器学习 · 计算机科学 2025-09-05 Yixiong Ren , Wenkang Du , Jianhui Zhou , Haiping Huang

Centered kernel alignment (CKA) is a popular metric for comparing representations, determining equivalence of networks, and neuroscience research. However, CKA does not account for the underlying manifold and relies on numerous heuristics…

机器学习 · 计算机科学 2025-10-28 Mohammad Tariqul Islam , Du Liu , Deblina Sarkar

High-dimensional data often exhibit dependencies among variables that violate the isotropic-noise assumption under which principal component analysis (PCA) is optimal. For cases where the noise is not independent and identically distributed…

Accurate prediction of compound-protein interactions (CPI) remains a cornerstone challenge in computational drug discovery. While existing sequence-based approaches leverage molecular fingerprints or graph representations, they critically…

机器学习 · 计算机科学 2025-04-08 Ngoc-Quang Nguyen

Integrated principal components analysis, or iPCA, is an unsupervised learning technique for grouped vector data recently defined by Tang and Allen. Like PCA, iPCA computes new axes that best explain the variance of the data, but iPCA is…

统计理论 · 数学 2023-07-04 Cole Franks , Visu Makam

A fundamental challenge in diagnostic imaging is the phenomenon of topological equivalence, where benign and malignant structures share global topology but differ in critical geometric detail, leading to diagnostic errors in both…

计算机视觉与模式识别 · 计算机科学 2026-03-05 Mariem Abaach , Ian Morilla

A seamless integration of neural networks with Isogeometric Analysis (IGA) was first introduced in [1] under the name of Hierarchical Deep-learning Neural Network (HiDeNN) and has systematically evolved into Isogeometric Convolution HiDeNN…

数值分析 · 数学 2024-06-06 Lei Zhang , Chanwook Park , T. J. R. Hughes , Wing Kam Liu

Motivated by the recently shown connection between self-attention and (kernel) principal component analysis (PCA), we revisit the fundamentals of PCA. Using the difference-of-convex (DC) framework, we present several novel formulations and…

机器学习 · 计算机科学 2025-10-22 Jan Quan , Johan Suykens , Panagiotis Patrinos

Big data is transforming our world, revolutionizing operations and analytics everywhere, from financial engineering to biomedical sciences. The complexity of big data often makes dimension reduction techniques necessary before conducting…

统计方法学 · 统计学 2018-01-08 Jianqing Fan , Qiang Sun , Wen-Xin Zhou , Ziwei Zhu

Principal Component Analysis (PCA) is an efficient tool to optimize the multiparameter tests of general relativity (GR) where one tests for simultaneous deviations in multiple post-Newtonian (PN) phasing coefficients by introducing…

广义相对论与量子宇宙学 · 物理学 2022-08-17 Sayantani Datta , M. Saleem , K. G. Arun , B. S. Sathyaprakash

Machine learning (ML) can process large sets of data generated from complex systems, which is ideal for classification tasks as often appeared in critical phenomena. Meanwhile ML techniques have been found effective in detecting critical…

计算物理 · 物理学 2024-05-07 Shen Jianmin , Wang Shanshan , Li Wei , Xu Dian , Yang Yuxiang , Wang Yanyang , Gao Feng , Zhu Yueying , Tuo Kui

We consider principal component analysis (PCA) in decomposable Gaussian graphical models. We exploit the prior information in these models in order to distribute its computation. For this purpose, we reformulate the problem in the sparse…

机器学习 · 统计学 2015-05-13 Ami Wiesel , Alfred O. Hero