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Collective cell migration lies at the intersection of developmental biology and non-equilibrium physics, where active processes give rise to emergent patterns that are biologically relevant. Here, we investigate dilatational modes--cycles…

软凝聚态物质 · 物理学 2025-07-23 Wenhui Tang , Mehrana R. Nejad , Adrian F. Pegoraro , L. Mahadevan , Ming Guo

The construction of a network of cell-to-cell contacts makes it possible to characterize the patterns and spatial organisation of tissues. Such networks are highly dynamic, depending on the changes of the tissue architecture caused by cell…

组织与器官 · 定量生物学 2013-06-25 Attila Csikász-Nagy , Luis M. Escudero , Martial Guillaud , Sean Sedwards , Buzz Baum , Matteo Cavaliere

Deformations of cell sheets during morphogenesis are driven by developmental processes such as cell division and cell shape changes. In morphoelastic shell theories of development, these processes appear as variations of the intrinsic…

软凝聚态物质 · 物理学 2021-03-03 Pierre A. Haas , Raymond E. Goldstein

Spatially extended cellular and dendritic array structures forming during solidification processes such as casting, welding, or additive manufacturing are generally polycrystalline. Both the array structure within each grain and the larger…

The dispersal of cells from an initially constrained location is a crucial aspect of many physiological phenomena ranging from morphogenesis to tumour spreading. In such processes, the way cell-cell interactions impact the motion of single…

Most organisms grow in space, whether they are viruses spreading within a host tissue or invasive species colonizing a new continent. Evolution typically selects for higher expansion rates during spatial growth, but it has been suggested…

种群与进化 · 定量生物学 2022-05-18 Hyunseok Lee , Jeff Gore , Kirill S. Korolev

Both community ecology and conservation biology seek further understanding of factors governing the advance of an invasive species. We model biological invasion as an individual-based, stochastic process on a two-dimensional landscape. An…

种群与进化 · 定量生物学 2010-07-12 Lauren O'Malley , G. Korniss , Thomas Caraco

Cancer cell migration between different body parts is the driving force behind cancer metastasis, which is the main cause of mortality of patients. Migration of cancer cells often proceeds by penetration through narrow cavities in locally…

细胞行为 · 定量生物学 2023-05-02 Qiyao Peng , Fred J Vermolen , Daphne Weihs

We present a theoretical framework based on an extension of dynamical density functional theory (DDFT) for describing the structure and dynamics of cells in living tissues and tumours. DDFT is a microscopic statistical mechanical theory for…

软凝聚态物质 · 物理学 2018-09-03 Hayder M. Al-Saedi , Andrew J. Archer , John Ward

A big challenge in current biology is to understand the exact self-organization mechanism underlying complex multi-physics coupling developmental processes. With multiscale computations of from subcellular gene expressions to cell…

细胞行为 · 定量生物学 2021-05-18 Xiaoliang Wang , Dongyun Bai

The homeostasis of epithelial tissue relies on a balance between the self-renewal of stem cell populations, cellular differentiation, and loss. Although this balance needs to be tightly regulated to avoid pathologies, such as tumor growth,…

生物物理 · 物理学 2024-04-10 Johannes C. Krämer , Edouard Hannezo , Gerhard Gompper , Jens Elgeti

Tissue organization plays a crucial role in morphogenesis, wound healing and cancer metastasis. Hydra, known for its regenerative capabilities, serves as an excellent model for studying cellular structures, particularly in pattern formation…

生物物理 · 物理学 2024-03-05 Aline Lütz , Carine Beatrici , Lívio Amaral , Leonardo Brunnet

We introduce a spatially extended mathematical model for Duchenne muscular dystrophy based on a damage-driven paradigm, in which immune recruitment is triggered by tissue injury. The model is formulated as a reaction--diffusion--chemotaxis…

数学物理 · 物理学 2026-04-06 Gaetana Gambino , Francesco Gargano , Alessandra Rizzo , Vincenzo Sciacca

The positioning of new cellular walls during cell division plays a key role in shaping plant tissue organization. The influence of cell geometry on the positioning of division planes has been previously captured into various geometrical…

机器学习 · 计算机科学 2025-07-31 Alexandre Durrmeyer , Jean-Christophe Palauqui , Philippe Andrey

In complex systems, groups of interacting objects may form prevalent and persistent spatiotemporal patterns, which we refer to as motifs. These motifs can exhibit features that reveal how individual objects interact with one another.…

生物物理 · 物理学 2025-12-12 Ying Chen Lim , Rakesh Das , Tetsuya Hiraiwa , N. Duane Loh

The mechanisms driving the collective movement of cells remain poorly understood. To contribute toward resolving this mystery, a model was formulated to theoretically explore the possible functions of polarized cell-cell adhesion in…

生物物理 · 物理学 2018-04-25 Katsuyoshi Matsushita

This work gives a mathematical study of tissue dynamics. We combine within-cell genome dynamics and diffusion between cells, where the synthesis of the two gives rise to the emergence of function. We introduce a concept of monotonicity and…

其他定量生物学 · 定量生物学 2016-10-17 Indika Rajapakse , Steve Smale

Based on a non-equilibrium mechanism for spatial pattern formation we study how position information can be controlled by locally coupled discrete dynamical networks, similar to gene regulation networks of cells in a developing…

分子网络 · 定量生物学 2009-08-26 Thimo Rohlf , Stefan Bornholdt

We consider a class of biologically-motivated stochastic processes in which a unicellular organism divides its resources (volume or damaged proteins, in particular) symmetrically or asymmetrically between its progeny. Assuming the final…

定量方法 · 定量生物学 2016-07-20 Andrew Marantan , Ariel Amir

We provide a review of recent advancements in nonlocal continuous models for migration, mainly from the perspective of its involvement in embryonal development and cancer invasion. Particular emphasis is placed on spatial nonlocality…

偏微分方程分析 · 数学 2019-11-14 Li Chen , Kevin Painter , Christina Surulescu , Anna Zhigun