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Zero-shot graph machine learning, especially with graph neural networks (GNNs), has garnered significant interest due to the challenge of scarce labeled data. While methods like self-supervised learning and graph prompt learning have been…

机器学习 · 计算机科学 2024-12-20 Duo Wang , Yuan Zuo , Fengzhi Li , Junjie Wu

Graph Neural Networks (GNNs) are promising surrogates for quantum mechanical calculations as they establish unprecedented low errors on collections of molecular dynamics (MD) trajectories. Thanks to their fast inference times they promise…

Reliable uncertainty estimation is critical for deploying neural networks (NNs) in real-world applications. While existing calibration techniques often rely on post-hoc adjustments or coarse-grained binning methods, they remain limited in…

机器学习 · 计算机科学 2025-05-30 Pedro Mendes , Paolo Romano , David Garlan

In an earlier paper the authors proved that limits of convergent graph sequences can be described by various structures, including certain 2-variable real functions called graphons, random graph models satisfying certain consistency…

组合数学 · 数学 2009-02-10 László Lovász , Balázs Szegedy

In this paper, we investigate the problem of generating the spanning trees of a graph $G$ up to the automorphisms or "symmetries" of $G$. After introducing and surveying this problem for general input graphs, we present algorithms that…

数据结构与算法 · 计算机科学 2025-08-20 Mithra Karamchedu , Lucas Bang

Quantifying uncertainty in automatically generated text is important for letting humans check potential hallucinations and making systems more reliable. Conformal prediction is an attractive framework to provide predictions imbued with…

计算与语言 · 计算机科学 2024-02-02 Dennis Ulmer , Chrysoula Zerva , André F. T. Martins

Graph diffusion problems such as the propagation of rumors, computer viruses, or smart grid failures are ubiquitous and societal. Hence it is usually crucial to identify diffusion sources according to the current graph diffusion…

机器学习 · 计算机科学 2022-06-27 Chen Ling , Junji Jiang , Junxiang Wang , Liang Zhao

Graph Neural Networks (GNNs) have achieved great success in learning graph representations and thus facilitating various graph-related tasks. However, most GNN methods adopt a supervised learning setting, which is not always feasible in…

机器学习 · 计算机科学 2022-08-16 Hongliang Chi , Yao Ma

Percolation is an important topic in climate, physics, materials science, epidemiology, finance, and so on. Prediction of percolation thresholds with machine learning methods remains challenging. In this paper, we build a powerful graph…

统计力学 · 物理学 2023-04-10 Hua Tian , Lirong Zhang , Youjin Deng , Wanzhou Zhang

Given a pair of graphs with the same number of vertices, the inexact graph matching problem consists in finding a correspondence between the vertices of these graphs that minimizes the total number of induced edge disagreements. We study…

机器学习 · 统计学 2020-07-06 Jesús Arroyo , Daniel L. Sussman , Carey E. Priebe , Vince Lyzinski

Standard negative log-likelihood (NLL) for Supervised Fine-Tuning (SFT) applies uniform token-level weighting. This rigidity creates a two-fold failure mode: (i) overemphasizing low-probability targets can amplify gradients on noisy…

计算与语言 · 计算机科学 2026-02-13 Zecheng Wang , Deyuan Liu , Chunshan Li , Yupeng Zhang , Zhengyun Zhao , Dianhui Chu , Bingning Wang , Dianbo Sui

Graph matching, also known as network alignment, refers to finding a bijection between the vertex sets of two given graphs so as to maximally align their edges. This fundamental computational problem arises frequently in multiple fields…

数据结构与算法 · 计算机科学 2021-08-10 Cheng Mao , Mark Rudelson , Konstantin Tikhomirov

We propose the characteristic generator, a novel one-step generative model that combines the efficiency of sampling in Generative Adversarial Networks (GANs) with the stable performance of flow-based models. Our model is driven by…

机器学习 · 计算机科学 2025-12-29 Zhao Ding , Chenguang Duan , Yuling Jiao , Ruoxuan Li , Jerry Zhijian Yang , Pingwen Zhang

Generation of graphs constrained by a specified graph edit distance from a source graph is important in applications such as cheminformatics, network anomaly synthesis, and structured data augmentation. Despite the growing demand for such…

机器学习 · 计算机科学 2026-04-08 Mamoona Ghafoor , Tatsuya Akutsu

Graph convolutional networks (GCNs) enable end-to-end learning on graph structured data. However, many works assume a given graph structure. When the input graph is noisy or unavailable, one approach is to construct or learn a latent graph…

计算机视觉与模式识别 · 计算机科学 2023-07-19 Avishkar Saha , Oscar Mendez , Chris Russell , Richard Bowden

Permutation equivariant neural networks are typically used to learn from data that lives on a graph. However, for any graph $G$ that has $n$ vertices, using the symmetric group $S_n$ as its group of symmetries does not take into account the…

机器学习 · 计算机科学 2024-05-29 Edward Pearce-Crump , William J. Knottenbelt

Recently, Graph Neural Networks (GNNs) have greatly advanced the task of graph classification. Typically, we first build a unified GNN model with graphs in a given training set and then use this unified model to predict labels of all the…

机器学习 · 计算机科学 2021-12-15 Yiqi Wang , Yao Ma , Wei Jin , Chaozhuo Li , Charu Aggarwal , Jiliang Tang

Graph-based semi-supervised learning usually involves two separate stages, constructing an affinity graph and then propagating labels for transductive inference on the graph. It is suboptimal to solve them independently, as the correlation…

计算机视觉与模式识别 · 计算机科学 2019-02-19 Qilin Li , Senjian An , Ling Li , Wanquan Liu

Recent years have seen substantial progress in neural generation of text, images, and audio, supported by mature training pipelines and large-scale optimization. For graphs, however, comparable progress has been more limited. We attribute…

计算机视觉与模式识别 · 计算机科学 2026-05-21 André Eberhard , Gerhard Neumann , Pascal Friederich

We seek to automate the design of molecules based on specific chemical properties. In computational terms, this task involves continuous embedding and generation of molecular graphs. Our primary contribution is the direct realization of…

机器学习 · 计算机科学 2019-04-01 Wengong Jin , Regina Barzilay , Tommi Jaakkola