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Computational text phenotyping is the practice of identifying patients with certain disorders and traits from clinical notes. Rare diseases are challenging to be identified due to few cases available for machine learning and the need for…

Alzheimer's disease is a progressive, debilitating neurodegenerative disease that affects 50 million people globally. Despite this substantial health burden, available treatments for the disease are limited and its fundamental causes remain…

机器学习 · 计算机科学 2024-04-02 Matthew West , Colin Magdamo , Lily Cheng , Yingnan He , Sudeshna Das

Although rare diseases are characterized by low prevalence, approximately 300 million people are affected by a rare disease. The early and accurate diagnosis of these conditions is a major challenge for general practitioners, who do not…

计算与语言 · 计算机科学 2021-11-12 Isabel Segura-Bedmar , David Camino-Perdonas , Sara Guerrero-Aspizua

Today, despite decades of developments in medicine and the growing interest in precision healthcare, vast majority of diagnoses happen once patients begin to show noticeable signs of illness. Early indication and detection of diseases,…

Rare genetic disorders affect more than 6% of the global population. Reaching a diagnosis is challenging because rare disorders are very diverse. Many disorders have recognizable facial features that are hints for clinicians to diagnose…

计算机视觉与模式识别 · 计算机科学 2023-02-27 Alexander Hustinx , Fabio Hellmann , Ömer Sümer , Behnam Javanmardi , Elisabeth André , Peter Krawitz , Tzung-Chien Hsieh

Automatic subphenotyping from electronic health records (EHRs)provides numerous opportunities to understand diseases with unique subgroups and enhance personalized medicine for patients. However, existing machine learning algorithms either…

机器学习 · 计算机科学 2024-10-18 Ruohan Wang , Zilong Wang , Ziyang Song , David Buckeridge , Yue Li

Objectives: In the United States, 25% of people with type 2 diabetes are undiagnosed. Conventional screening models use limited demographic information to assess risk. We evaluated whether electronic health record (EHR) phenotyping could…

定量方法 · 定量生物学 2015-01-13 Ariana E. Anderson , Wesley T. Kerr , April Thames , Tong Li , Jiayang Xiao , Mark S. Cohen

Rare diseases are characterized by low prevalence and are often chronically debilitating or life-threatening. Imaging-based classification of rare diseases is challenging due to the severe shortage in training examples. Few-shot learning…

计算机视觉与模式识别 · 计算机科学 2021-10-12 Jinghan Sun , Dong Wei , Kai Ma , Liansheng Wang , Yefeng Zheng

The extraction of phenotype information which is naturally contained in electronic health records (EHRs) has been found to be useful in various clinical informatics applications such as disease diagnosis. However, due to imprecise…

计算与语言 · 计算机科学 2019-11-12 Jingqing Zhang , Xiaoyu Zhang , Kai Sun , Xian Yang , Chengliang Dai , Yike Guo

This paper proposes a weakly-supervised machine learning-based approach aiming at a tool to alert patients about possible respiratory diseases. Various types of pathologies may affect the respiratory system, potentially leading to severe…

声音 · 计算机科学 2023-12-05 Michele Cozzatti , Federico Simonetta , Stavros Ntalampiras

Deep Convolutional Neural Networks have proven effective in solving the task of semantic segmentation. However, their efficiency heavily relies on the pixel-level annotations that are expensive to get and often require domain expertise,…

计算机视觉与模式识别 · 计算机科学 2020-07-03 Ostap Viniavskyi , Mariia Dobko , Oles Dobosevych

The task of parsing subcutaneous vessels in clinical images is often hindered by the high cost and limited availability of ground truth data, as well as the challenge of low contrast and noisy vessel appearances across different patients…

计算机视觉与模式识别 · 计算机科学 2026-05-11 Ayaan Nooruddin Siddiqui , Mahnoor Zaidi , Ayesha Nazneen Shahbaz , Priyadarshini Chatterjee , Krishnan Menon Iyer

Computational phenotyping allows for unsupervised discovery of subgroups of patients as well as corresponding co-occurring medical conditions from electronic health records (EHR). Typically, EHR data contains demographic information,…

机器学习 · 计算机科学 2023-10-18 Florian Becker , Age K. Smilde , Evrim Acar

Phenotyping is fundamental to rare disease diagnosis, but manual curation of structured phenotypes from clinical notes is labor-intensive and difficult to scale. Existing artificial intelligence approaches typically optimize individual…

Analysing electrocardiograms (ECGs) is an inexpensive and non-invasive, yet powerful way to diagnose heart disease. ECG studies using Machine Learning to automatically detect abnormal heartbeats so far depend on large, manually annotated…

信号处理 · 电气工程与系统科学 2022-01-11 Mononito Goswami , Benedikt Boecking , Artur Dubrawski

Accurately identifying patients with specific medical conditions is a key challenge when using clinical data from electronic health records. Our objective was to comprehensively assess when weakly-supervised prediction methods, which use…

统计方法学 · 统计学 2026-04-14 Yunjing Hong , Jennifer C. Nelson , Brian D. Williamson

Phenotyping electronic health records (EHR) focuses on defining meaningful patient groups (e.g., heart failure group and diabetes group) and identifying the temporal evolution of patients in those groups. Tensor factorization has been an…

The Recurrent Neural Network-Transducer (RNN-T) is widely adopted in end-to-end (E2E) automatic speech recognition (ASR) tasks but depends heavily on large-scale, high-quality annotated data, which are often costly and difficult to obtain.…

The use of Electronic Health Records (EHRs) has increased dramatically in the past 15 years, as, it is considered an important source of managing data od patients. The EHRs are primary sources of disease diagnosis and demographic data of…

机器学习 · 计算机科学 2024-04-02 Bushra F. Alsaqer , Alaa F. Alsaqer , Amna Asif

Advancement in sequencing technology enables the study of association between complex disorders and rare variants with low minor allele frequencies. One of the major challenges in rare variant testing is lack of statistical power of…

定量方法 · 定量生物学 2016-07-27 Rui Sun , Haoyi Weng , Inchi Hu , Junfeng Guo , William K. K. Wu , Benny Chung-Ying Zee , Maggie Haitian Wang
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