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Optimal Transport (OT) has recently emerged as a powerful framework for learning minimal-displacement maps between distributions. The predominant approach involves a neural parametrization of the Monge formulation of OT, typically assuming…

机器学习 · 计算机科学 2024-07-23 Athina Sotiropoulou , David Alvarez-Melis

Protein sequence alignment is a cornerstone of bioinformatics, traditionally approached using dynamic programming (DP) algorithms that find an optimal sequential path. This paper introduces UniOTalign, a novel framework that recasts…

定量方法 · 定量生物学 2025-10-09 Yue Hu , Zanxia Cao , Yingchao Liu

Graph data augmentation has shown superiority in enhancing generalizability and robustness of GNNs in graph-level classifications. However, existing methods primarily focus on the augmentation in the graph signal space and the graph…

机器学习 · 计算机科学 2023-10-05 Xinyu Ma , Xu Chu , Yasha Wang , Yang Lin , Junfeng Zhao , Liantao Ma , Wenwu Zhu

The Optimal Transport (OT) problem investigates a transport map that connects two distributions while minimizing a given cost function. Finding such a transport map has diverse applications in machine learning, such as generative modeling…

机器学习 · 计算机科学 2024-10-23 Jaemoo Choi , Jaewoong Choi

We investigate unpaired image inverse problems, a challenging setting where only independent, non-paired sets of noisy measurements and clean target signals are available for training. We propose a novel inverse problem solver based on…

机器学习 · 计算机科学 2026-05-21 Donggyu Lee , Taekyung Lee , Jaewoong Choi

Unbalanced optimal transport (UOT) provides a principled framework for modeling single-cell transitions and birth-death dynamics, but its high computational cost limits scalability to large-scale datasets. Although single-cell data often…

机器学习 · 计算机科学 2026-05-19 Qiangwei Peng , Lezhi Chen , Peijie Zhou

In many real-world contexts, such as social or transport networks, data exhibit both structural connectivity and node-level attributes. For example, roads in a transport network can be characterized not only by their connectivity but also…

统计方法学 · 统计学 2025-12-18 Ioana Gavra , Ketsia Guichard-Sustowski , Loïc Le Marrec

In this note, we derive upper-bounds on the statistical estimation rates of unbalanced optimal transport (UOT) maps for the quadratic cost. Our work relies on the stability of the semi-dual formulation of optimal transport (OT) extended to…

统计理论 · 数学 2022-03-18 Adrien Vacher , François-Xavier Vialard

Unbalanced optimal transport (UOT) extends classical optimal transport to measures with different total masses, but statistical guarantees for Monge-type estimation remain limited. We study unbalanced transport with quadratic cost and…

统计理论 · 数学 2026-05-12 Donlapark Ponnoprat , Noboru Isobe , Masaaki Imaizumi

Deep learning-based methods are growing prominence for planning purposes. In this paper, we present a hybrid planner that combines a graph machine learning model and an optimal solver based on branch and bound tree search for path-planning…

人工智能 · 计算机科学 2022-04-05 Kevin Osanlou , Andrei Bursuc , Christophe Guettier , Tristan Cazenave , Eric Jacopin

Unbalanced optimal transport (UOT) is a natural extension of optimal transport (OT) allowing comparison between measures of different masses. It arises naturally in machine learning by offering a robustness against outliers. The aim of this…

最优化与控制 · 数学 2025-10-06 Luca Nenna , Paul Pegon , Louis Tocquec

The Unbalanced Optimal Transport (UOT) problem plays increasingly important roles in computational biology, computational imaging and deep learning. Scaling algorithm is widely used to solve UOT due to its convenience and good convergence…

最优化与控制 · 数学 2024-02-28 Xiang Chen , Faqiang Wang , Jun Liu , Li Cui

During training, supervised object detection tries to correctly match the predicted bounding boxes and associated classification scores to the ground truth. This is essential to determine which predictions are to be pushed towards which…

计算机视觉与模式识别 · 计算机科学 2023-07-06 Henri De Plaen , Pierre-François De Plaen , Johan A. K. Suykens , Marc Proesmans , Tinne Tuytelaars , Luc Van Gool

In this paper, we address the numerical solution of the Optimal Transport Problem on undirected weighted graphs, taking the shortest path distance as transport cost. The optimal solution is obtained from the long-time limit of the gradient…

数值分析 · 数学 2020-09-29 Enrico Facca , Michele Benzi

The relevance of optimal transport methods to machine learning has long been hindered by two salient limitations. First, the $O(n^3)$ computational cost of standard sample-based solvers (when used on batches of $n$ samples) is prohibitive.…

机器学习 · 计算机科学 2023-06-01 Meyer Scetbon , Michal Klein , Giovanni Palla , Marco Cuturi

We study the fundamental computational problem of approximating optimal transport (OT) equations using neural differential equations (Neural ODEs). More specifically, we develop a novel framework for approximating unbalanced optimal…

数值分析 · 数学 2026-05-21 Minh-Nhat Phung , Minh-Binh Tran

Current graph neural network (GNN) architectures naively average or sum node embeddings into an aggregated graph representation -- potentially losing structural or semantic information. We here introduce OT-GNN, a model that computes graph…

机器学习 · 统计学 2021-10-12 Benson Chen , Gary Bécigneul , Octavian-Eugen Ganea , Regina Barzilay , Tommi Jaakkola

Although deep neural networks are well-known for their outstanding performance in tackling complex tasks, their hunger for computational resources remains a significant hurdle, posing energy-consumption issues and restricting their…

机器学习 · 计算机科学 2025-07-16 Victor Quétu , Zhu Liao , Nour Hezbri , Fabio Pizzati , Enzo Tartaglione

Optimal transport (OT) provides effective tools for comparing and mapping probability measures. We propose to leverage the flexibility of neural networks to learn an approximate optimal transport map. More precisely, we present a new and…

机器学习 · 计算机科学 2022-07-06 Florentin Coeurdoux , Nicolas Dobigeon , Pierre Chainais

A novel Gromov-Wasserstein learning framework is proposed to jointly match (align) graphs and learn embedding vectors for the associated graph nodes. Using Gromov-Wasserstein discrepancy, we measure the dissimilarity between two graphs and…

机器学习 · 计算机科学 2019-05-08 Hongteng Xu , Dixin Luo , Hongyuan Zha , Lawrence Carin