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Complex networks have been widely used in science and technology because of their ability to represent several systems. One of these systems is found in Biochemistry, in which the synthesis of new nanoparticles is a hot topic. However, the…

Structural causal models (SCMs) are a widespread formalism to deal with causal systems. A recent direction of research has considered the problem of relating formally SCMs at different levels of abstraction, by defining maps between SCMs…

人工智能 · 计算机科学 2022-07-19 Fabio Massimo Zennaro

Complex networks of real-world systems are believed to be controlled by common phenomena, producing structures far from regular or random. Clustering, community structure and assortative mixing by degree are perhaps among most prominent…

物理与社会 · 物理学 2012-02-16 Lovro Šubelj , Marko Bajec

Hypergraphs and simplical complexes both capture the higher-order interactions of complex systems, ranging from higher-order collaboration networks to brain networks. One open problem in the field is what should drive the choice of the…

物理与社会 · 物理学 2022-09-28 Federica Baccini , Filippo Geraci , Ginestra Bianconi

We present simplicial neural networks (SNNs), a generalization of graph neural networks to data that live on a class of topological spaces called simplicial complexes. These are natural multi-dimensional extensions of graphs that encode not…

机器学习 · 计算机科学 2020-12-29 Stefania Ebli , Michaël Defferrard , Gard Spreemann

Neural networks have become an increasingly popular tool for solving many real-world problems. They are a general framework for differentiable optimization which includes many other machine learning approaches as special cases. In this…

机器学习 · 计算机科学 2019-07-22 Bruno Gavranović

We introduce the concept of a semigroup coupled cell network and show that the collection of semigroup network vector fields forms a Lie algebra. This implies that near a dynamical equilibrium the local normal form of a semigroup network is…

动力系统 · 数学 2012-09-17 Bob Rink , Jan Sanders

The aim of this paper is to introduce a novel dictionary learning algorithm for sparse representation of signals defined over combinatorial topological spaces, specifically, regular cell complexes. Leveraging Hodge theory, we embed topology…

信号处理 · 电气工程与系统科学 2025-03-17 Enrico Grimaldi , Claudio Battiloro , Paolo Di Lorenzo

Understanding what deep network models capture in their learned representations is a fundamental challenge in computer vision. We present a new methodology to understanding such vision models, the Visual Concept Connectome (VCC), which…

计算机视觉与模式识别 · 计算机科学 2024-04-11 Matthew Kowal , Richard P. Wildes , Konstantinos G. Derpanis

We introduce the notion of coupled link cube complex (CLCC) as a means of constructing interesting cocompactly cubulated groups. CLCCs are defined locally, making them a useful tool when precise control over the links is required. In this…

度量几何 · 数学 2023-02-15 Robert Kropholler , Federico Vigolo

Relationship between agents can be conveniently represented by graphs. When these relationships have different modalities, they are better modelled by multilayer graphs where each layer is associated with one modality. Such graphs arise…

机器学习 · 统计学 2021-03-05 Guillaume Braun , Hemant Tyagi , Christophe Biernacki

Cell signaling networks are complex and often incompletely characterized, making it difficult to obtain a comprehensive picture of the mechanisms they encode. Mathematical modeling of these networks provides important clues, but the models…

分子网络 · 定量生物学 2022-11-07 Soutick Saha , Hye-ran Moon , Bumsoo Han , Andrew Mugler

Compound graphs are networks in which vertices can be grouped into larger subsets, with these subsets capable of further grouping, resulting in a nesting that can be many levels deep. In several applications, including biological workflows,…

人机交互 · 计算机科学 2024-08-09 Chang Han , Justin Lieffers , Clayton Morrison , Katherine E. Isaacs

The unsourced MAC model was originally introduced to study the communication scenario in which a number of devices with low-complexity and low-energy wish to upload their respective messages to a base station. In the original problem…

信息论 · 计算机科学 2020-11-24 Allen Hao , Stefano Rini , Vamsi Amalladinne , Asit Kumar Pradhan , Jean-Francois Chamberland

Graphs are common mathematical structures that are visual and intuitive. They constitute a natural and seamless way for system modelling in science, engineering and beyond, including computer science, biology, business process modelling,…

形式语言与自动机理论 · 计算机科学 2020-12-03 Berthold Hoffmann , Mark Minas

We present a diagrammatic method to build up sophisticated cellular automata (CAs) as models of complex physical systems. The diagrams complement the mathematical approach to CA modeling, whose details are also presented here, and allow CAs…

元胞自动机与格子气 · 物理学 2018-04-03 Vladimir García-Morales

We introduce DAMCC (Deep Autoregressive Model for Dynamic Combinatorial Complexes), the first deep learning model designed to generate dynamic combinatorial complexes (CCs). Unlike traditional graph-based models, CCs capture higher-order…

机器学习 · 计算机科学 2025-03-05 Ata Tuna

Biological cells, by definition, are the basic units which contain the fundamental molecules of life of which all living things are composed. Understanding how they function and differentiating cells from one another therefore is of…

信号处理 · 电气工程与系统科学 2021-01-07 Hassan Raji , Muhammad Tayyab , Jianye Sui , Seyed Reza Mahmoodi , Mehdi Javanmard

Biomedical networks (or graphs) are universal descriptors for systems of interacting elements, from molecular interactions and disease co-morbidity to healthcare systems and scientific knowledge. Advances in artificial intelligence,…

机器学习 · 计算机科学 2025-02-07 Michelle M. Li , Kexin Huang , Marinka Zitnik

Complex networks are an important paradigm of modern complex systems sciences which allows quantitatively assessing the structural properties of systems composed of different interacting entities. During the last years, intensive efforts…