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Quantifying the myelin sheath radius of myelinated axons in vivo is important for understanding, diagnosing, and monitoring various neurological disorders. Despite advancements in diffusion MRI (dMRI) microstructure techniques, there are…

Deep learning convolutional neural networks have proved to be a powerful tool for MRI analysis. In current work, we explore the potential of the deformable convolutional deep neural network layers for MRI data classification. We propose new…

图像与视频处理 · 电气工程与系统科学 2019-11-06 Marina Pominova , Ekaterina Kondrateva , Maksim Sharaev , Sergey Pavlov , Alexander Bernstein , Evgeny Burnaev

Modern diffusion MRI sequences commonly acquire a large number of volumes with diffusion sensitization gradients of differing strengths or directions. Such sequences rely on echo-planar imaging (EPI) to achieve reasonable scan duration.…

图像与视频处理 · 电气工程与系统科学 2025-06-06 Antoine Legouhy , Ross Callaghan , Whitney Stee , Philippe Peigneux , Hojjat Azadbakht , Hui Zhang

Diffusion MRI (dMRI) is a valuable imaging technique to study the brain in vivo. However, the resolution of dMRI is limited by the low signal-to-noise ratio (SNR) of this technique. Various acquisition strategies have been developed to…

医学物理 · 物理学 2023-05-30 Sajjad Feizollah , Christine L. Tardif

Image registration is a fundamental task that aligns anatomical structures between images. While CNNs perform well, they lack rotation equivariance - a rotated input does not produce a correspondingly rotated output. This hinders…

计算机视觉与模式识别 · 计算机科学 2026-04-10 Arghavan Rezvani , Kun Han , Anthony T. Wu , Pooya Khosravi , Xiaohui Xie

Diffusion magnetic resonance imaging (dMRI) often suffers from low spatial and angular resolution due to inherent limitations in imaging hardware and system noise, adversely affecting the accurate estimation of microstructural parameters…

图像与视频处理 · 电气工程与系统科学 2025-01-28 Ruoyou Wu , Jian Cheng , Cheng Li , Juan Zou , Wenxin Fan , Hua Guo , Yong Liang , Shanshan Wang

In this paper, we propose a method for denoising diffusion-weighted images (DWI) of the brain using a convolutional neural network trained on realistic, synthetic MR data. We compare our results to averaging of repeated scans, a widespread…

图像与视频处理 · 电气工程与系统科学 2022-06-02 Jakub Jurek , Andrzej Materka , Kamil Ludwisiak , Agata Majos , Kamil Gorczewski , Kamil Cepuch , Agata Zawadzka

Processing information on 3D objects requires methods stable to rigid-body transformations, in particular rotations, of the input data. In image processing tasks, convolutional neural networks achieve this property using…

定量方法 · 定量生物学 2021-01-07 Ilia Igashov , Nikita Pavlichenko , Sergei Grudinin

We present a diffeomorphic image registration algorithm to learn spatial transformations between pairs of images to be registered using fully convolutional networks (FCNs) under a self-supervised learning setting. The network is trained to…

计算机视觉与模式识别 · 计算机科学 2020-10-06 Hongming Li , Yong Fan

We propose an end-to-end deep neural encoder-decoder model to encode and decode brain activity in response to naturalistic stimuli using functional magnetic resonance imaging (fMRI) data. Leveraging temporally correlated input from…

计算机视觉与模式识别 · 计算机科学 2025-07-17 Florian David , Michael Chan , Elenor Morgenroth , Patrik Vuilleumier , Dimitri Van De Ville

Fiber orientation distributions (FODs) is a popular model to represent the diffusion MRI (dMRI) data. However, imaging artifacts such as susceptibility-induced distortion in dMRI can cause signal loss and lead to the corrupted…

图像与视频处理 · 电气工程与系统科学 2024-06-21 Shuo Huang , Lujia Zhong , Yonggang Shi

Diffusion magnetic resonance imaging (dMRI) enables non-invasive investigation of tissue microstructure. The Standard Model (SM) of white matter aims to disentangle dMRI signal contributions from intra- and extra-axonal water compartments.…

图像与视频处理 · 电气工程与系统科学 2026-04-15 Tom Hendriks , Gerrit Arends , Edwin Versteeg , Anna Vilanova , Maxime Chamberland , Chantal M. W. Tax

Convolutional Neural Networks (CNNs) have been providing the state-of-the-art performance for learning-related problems involving 2D/3D images in Euclidean space. However, unlike in the Euclidean space, the shapes of many structures in…

计算机视觉与模式识别 · 计算机科学 2019-04-02 Fenqiang Zhao , Shunren Xia , Zhengwang Wu , Dingna Duan , Li Wang , Weili Lin , John H Gilmore , Dinggang Shen , Gang Li

Spatiotemporal flows of neural activity, such as traveling waves, have been observed throughout the brain since the earliest recordings; yet there is still little consensus on their functional role. Recent experiments and models have linked…

神经元与认知 · 定量生物学 2026-02-03 T. Anderson Keller , Lyle Muller , Terrence J. Sejnowski , Max Welling

This paper investigates the super-resolution (SR) of velocity fields in two-dimensional fluids from the viewpoint of rotational equivariance. SR refers to techniques that estimate high-resolution images from those in low resolution and has…

流体动力学 · 物理学 2022-10-26 Yuki Yasuda , Ryo Onishi

Hyperspectral images are of crucial importance in order to better understand features of different materials. To reach this goal, they leverage on a high number of spectral bands. However, this interesting characteristic is often paid by a…

图像与视频处理 · 电气工程与系统科学 2020-06-01 Jin-Fan Hu , Ting-Zhu Huang , Liang-Jian Deng , Tai-Xiang Jiang , Gemine Vivone , Jocelyn Chanussot

Diffusion-weighted MRI (DW-MRI) is used to quantitatively characterize the microscopic structure of soft tissue due to the anisotropic diffusion of water in muscle. Applications such as fiber tractography or modeling of tumor spread in soft…

医学物理 · 物理学 2024-06-07 Nadya Shusharina , Xiaofeng Liu , Evangelia Kaza , Miranda Lam , Stephan Maier , Jonghye Woo

With the advent of group equivariant convolutions in deep networks literature, spherical CNNs with $\mathsf{SO}(3)$-equivariant layers have been developed to cope with data that are samples of signals on the sphere $S^2$. One can implicitly…

计算机视觉与模式识别 · 计算机科学 2023-05-29 Gianfranco Cortes , Yue Yu , Robin Chen , Melissa Armstrong , David Vaillancourt , Baba C. Vemuri

Accurate local fiber orientation distribution (FOD) modeling based on diffusion magnetic resonance imaging (dMRI) capable of resolving complex fiber configurations benefits from specific acquisition protocols that sample a high number of…

图像与视频处理 · 电气工程与系统科学 2020-12-18 Oeslle Lucena , Sjoerd B. Vos , Vejay Vakharia , John Duncan , Keyoumars Ashkan , Rachel Sparks , Sebastien Ourselin

Diffusion MRI (dMRI) plays a crucial role in studying brain white matter connectivity. Cortical surface reconstruction (CSR), including the inner whiter matter (WM) and outer pial surfaces, is one of the key tasks in dMRI analyses such as…