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Persistent Homology is a powerful tool in Topological Data Analysis (TDA) to capture topological properties of data succinctly at different spatial resolutions. For graphical data, shape, and structure of the neighborhood of individual data…

社会与信息网络 · 计算机科学 2018-11-12 Sumit Bhatia , Bapi Chatterjee , Deepak Nathani , Manohar Kaul

Although Deep Learning (DL) has achieved success in complex Artificial Intelligence (AI) tasks, it suffers from various notorious problems (e.g., feature redundancy, and vanishing or exploding gradients), since updating parameters in…

机器学习 · 计算机科学 2023-02-17 Yanhong Fei , Xian Wei , Yingjie Liu , Zhengyu Li , Mingsong Chen

The Extended Persistent Homology Transform (XPHT) is a topological transform which takes as input a shape embedded in Euclidean space, and to each unit vector assigns the extended persistence module of the height function over that shape…

代数拓扑 · 数学 2022-09-01 Katharine Turner , Vanessa Robins , James Morgan

Although deep learning approaches have had tremendous success in image, video and audio processing, computer vision, and speech recognition, their applications to three-dimensional (3D) biomolecular structural data sets have been hindered…

定量方法 · 定量生物学 2017-11-01 Zixuan Cang , Guo-Wei Wei

Persistent Homology (PH) has been successfully used to train networks to detect curvilinear structures and to improve the topological quality of their results. However, existing methods are very global and ignore the location of topological…

计算机视觉与模式识别 · 计算机科学 2022-12-27 Doruk Oner , Adélie Garin , Mateusz Koziński , Kathryn Hess , Pascal Fua

We propose Lagrangian Descriptors (LDs) as a diagnostic framework for evaluating neural network models of Hamiltonian systems beyond conventional trajectory-based metrics. Standard error measures quantify short-term predictive accuracy but…

机器学习 · 计算机科学 2026-04-02 Abrari Noor Hasmi , Haralampos Hatzikirou , Hadi Susanto

This paper presents a novel physics-inspired deep learning approach for point cloud processing motivated by the natural flow phenomena in fluid mechanics. Our learning architecture jointly defines data in an Eulerian world space, using a…

计算机视觉与模式识别 · 计算机科学 2020-06-26 Xingzhe He , Helen Lu Cao , Bo Zhu

Many attempts have been made in recent decades to integrate machine learning (ML) and topological data analysis. A prominent problem in applying persistent homology to ML tasks is finding a vector representation of a persistence diagram…

机器学习 · 计算机科学 2022-04-25 Zhetong Dong , Hongwei Lin , Chi Zhou

High-dimensional data with intrinsic low-dimensional structure is ubiquitous in machine learning and data science. While various approaches allow one to learn a data manifold with a Riemannian structure from finite samples, performing…

最优化与控制 · 数学 2026-05-07 Willem Diepeveen , Melanie Weber

Euclidean representations distort data with intrinsic non-Euclidean structure. While Riemannian representation learning offers a solution by embedding data onto matching manifolds, it typically relies on an encoder to estimate densities on…

机器学习 · 计算机科学 2026-05-05 Andreas Bjerregaard , Søren Hauberg , Anders Krogh

In machine learning, data is usually represented in a (flat) Euclidean space where distances between points are along straight lines. Researchers have recently considered more exotic (non-Euclidean) Riemannian manifolds such as hyperbolic…

机器学习 · 计算机科学 2021-01-12 Marc T. Law , Jos Stam

3-D shape is important to chemistry, but how important? Machine learning works best when the inputs are simple and match the problem well. Chemistry datasets tend to be very small compared to those generally used in machine learning so we…

机器学习 · 计算机科学 2023-04-18 Ella Gale

We propose a practical computational framework for detecting structural changes in parameter-dependent topological data. In many applications, such as time-series data analysis, anomaly detection, and monitoring of systems under changing…

代数拓扑 · 数学 2026-05-28 Satoshi Kanno , Rei Nishimura , Hiroshi Yamauchi , Yoshi-aki Shimada

Developing methods to process irregularly structured data is crucial in applications like gene-regulatory, brain, power, and socioeconomic networks. Graphs have been the go-to algebraic tool for modeling the structure via nodes and edges…

信号处理 · 电气工程与系统科学 2025-02-17 Elvin Isufi , Geert Leus , Baltasar Beferull-Lozano , Sergio Barbarossa , Paolo Di Lorenzo

We explore the use of Physics Informed Neural Networks to analyse nonlinear Hamiltonian Dynamical Systems with a first integral of motion. In this work, we propose an architecture which combines existing Hamiltonian Neural Network…

机器学习 · 计算机科学 2023-08-09 Vedanta Thapar

Persistent homology is a mathematical tool used for studying the shape of data by extracting its topological features. It has gained popularity in network science due to its applicability in various network mining problems, including…

代数拓扑 · 数学 2023-06-21 Mehmet Emin Aktas , Thu Nguyen , Rakin Riza , Muhammad Ifte Islam , Esra Akbas

Persistent homology is an effective method for extracting topological information, represented as persistent diagrams, of spatial structure data. Hence it is well-suited for the study of protein structures. Attempts to incorporate…

机器学习 · 计算机科学 2024-08-01 An Wu , Yu Pan , Fuqi Zhou , Jinghui Yan , Chuanlu Liu

Topological Data Analysis (TDA) is a novel statistical technique, particularly powerful for the analysis of large and high dimensional data sets. Much of TDA is based on the tool of persistent homology, represented visually via persistence…

应用统计 · 统计学 2017-11-07 Sarit Agami , Robert J. Adler

This paper is a cursory study on how topological features are preserved within the internal representations of neural network layers. Using techniques from topological data analysis, namely persistent homology, the topological features of a…

机器学习 · 计算机科学 2022-08-16 Archie Shahidullah

Persistent topological properties of an image serve as an additional descriptor providing an insight that might not be discovered by traditional neural networks. The existing research in this area focuses primarily on efficiently…

计算机视觉与模式识别 · 计算机科学 2023-03-07 Ekaterina Khramtsova , Guido Zuccon , Xi Wang , Mahsa Baktashmotlagh