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Phylogenetic networks are increasingly being considered as better suited to represent the complexity of the evolutionary relationships between species. One class of phylogenetic networks that has received a lot of attention recently is the…

数据结构与算法 · 计算机科学 2023-05-02 Kaari Landry , Olivier Tremblay-Savard , Manuel Lafond

The problem of packing ellipsoids of different sizes and shapes into an ellipsoidal container so as to minimize a measure of overlap between ellipsoids is considered. A bilevel optimization formulation is given, together with an algorithm…

最优化与控制 · 数学 2012-04-03 Caroline Uhler , Stephen J. Wright

We study the problem of decomposing (clustering) a tree with respect to costs attributed to pairs of nodes, so as to minimize the sum of costs for those pairs of nodes that are in the same component (cluster). For the general case and for…

离散数学 · 计算机科学 2017-08-17 Jan-Hendrik Lange , Bjoern Andres

This work studies the combinatorial optimization problem of finding an optimal core tensor shape, also called multilinear rank, for a size-constrained Tucker decomposition. We give an algorithm with provable approximation guarantees for its…

数据结构与算法 · 计算机科学 2024-06-19 Mehrdad Ghadiri , Matthew Fahrbach , Gang Fu , Vahab Mirrokni

$H$-Packing is the problem of finding a maximum number of vertex-disjoint copies of $H$ in a given graph $G$. $H$-Partition is the special case of finding a set of vertex-disjoint copies that cover each vertex of $G$ exactly once. Our goal…

数据结构与算法 · 计算机科学 2025-09-09 Barış Can Esmer , Dániel Marx

We consider several problems related to packing forests in graphs. The first one is to find $k$ edge-disjoint forests in a directed graph $G$ of maximal size such that the indegree of each vertex in these forests is at most $k$. We describe…

数据结构与算法 · 计算机科学 2026-01-26 Pavel Arkhipov , Vladimir Kolmogorov

The Rooted Maximum Leaf Outbranching problem consists in finding a spanning directed tree rooted at some prescribed vertex of a digraph with the maximum number of leaves. Its parameterized version asks if there exists such a tree with at…

离散数学 · 计算机科学 2009-04-20 Jean Daligault , Stephan Thomasse

Higher-dimensional orthogonal packing problems have a wide range of practical applications, including packing, cutting, and scheduling. In the context of a branch-and-bound framework for solving these packing problems to optimality, it is…

数据结构与算法 · 计算机科学 2007-05-23 Sandor P. Fekete , Joerg Schepers

We reduce the problem of finding an augmenting path in a general graph to a reachability problem in a directed bipartite graph. A slight modification of depth-first search leads to an algorithm for finding such paths. Although this setting…

数据结构与算法 · 计算机科学 2015-09-17 Norbert Blum

Arboricity is a graph parameter akin to chromatic number, in that it seeks to partition the vertices into the smallest number of sparse subgraphs. Where for the chromatic number we are partitioning the vertices into independent sets, for…

The Forest Augmentation Problem (FAP) asks for a minimum set of additional edges (links) that make a given forest 2-edge-connected while spanning all vertices. A key special case is the Path Augmentation Problem (PAP), where the input…

数据结构与算法 · 计算机科学 2025-05-22 Felix Hommelsheim

Broadcasting in a computer network is a method of transferring a message to all recipients simultaneously. It is common in this situation to use a tree with many leaves to perform the broadcast, as internal nodes have to forward the…

数据结构与算法 · 计算机科学 2020-07-16 Cristina G. Fernandes , Carla N. Lintzmayer

Reachability and shortest path problems are NL-complete for general graphs. They are known to be in L for graphs of tree-width 2 [JT07]. However, for graphs of tree-width larger than 2, no bound better than NL is known. In this paper, we…

计算复杂性 · 计算机科学 2010-02-03 Bireswar Das , Samir Datta , Prajakta Nimbhorkar

Reachability analysis is a powerful tool when it comes to capturing the behaviour, thus verifying the safety, of autonomous systems. However, general-purpose methods, such as Hamilton-Jacobi approaches, suffer from the curse of…

最优化与控制 · 数学 2022-10-27 Alessandro Alla , Peter M. Dower , Vincent Liu

Graph packing and partitioning problems have been studied in many contexts, including from the algorithmic complexity perspective. Consider the packing problem of determining whether a graph contains a spanning tree and a cycle that do not…

组合数学 · 数学 2014-09-09 Jed Yang

Color-constrained subgraph problems are those where we are given an edge-colored (directed or undirected) graph and the task is to find a specific type of subgraph, like a spanning tree, an arborescence, a single-source shortest path tree,…

数据结构与算法 · 计算机科学 2024-07-24 P. S. Ardra , Jasine Babu , Kritika Kashyap , R. Krithika , Sreejith K. Pallathumadam , Deepak Rajendraprasad

Given a graph $G = (V,E)$, $A \subseteq V$, and integers $k$ and $\ell$, the \textsc{$(A,\ell)$-Path Packing} problem asks to find $k$ vertex-disjoint paths of length $\ell$ that have endpoints in $A$ and internal points in $V \setminus A$.…

The inference of minimum spanning arborescences within a set of objects is a general problem which translates into numerous application-specific unsupervised learning tasks. We introduce a unified and generic structure called edit…

计算机视觉与模式识别 · 计算机科学 2021-08-02 Lucas Gnecco , Nicolas Boria , Sébastien Bougleux , Florian Yger , David B. Blumenthal

Given a directed graph $G=(V,A)$, the Directed Maximum Leaf Spanning Tree problem asks to compute a directed spanning tree (i.e., an out-branching) with as many leaves as possible. By designing a Branch-and-Reduced algorithm combined with…

数据结构与算法 · 计算机科学 2009-11-11 Daniel Raible , Henning Fernau

We introduce the problem of finding a spanning tree along with a partition of the tree edges into fewest number of feasible sets, where constraints on the edges define feasibility. The motivation comes from wireless networking, where we…

网络与互联网体系结构 · 计算机科学 2018-03-14 Magnus M. Halldorsson , Guy Kortsarz , Pradipta Mitra , Tigran Tonoyan