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相关论文: Flux ratios for effects of permanent charges on io…

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In this research, we explore how permanent charges affect the movement of ionic currents through ion channels. We use a quasi-one-dimensional classical Poisson-Nernst-Planck (PNP) model to study two types of ions, one positively charged and…

动力系统 · 数学 2023-12-29 Hamid Mofidi

In this work, we examine effects of large permanent charges on ionic flow through ion channels based on a quasi-one dimensional Poisson-Nernst-Planck model. It turns out large positive permanent charges inhibit the flux of cation as…

定量方法 · 定量生物学 2017-12-20 Liwei Zhang , Bob Eisenberg , Weishi Liu

Ionic flow carries electrical signals for cells to communicate with each other. The permanent charge of an ion channel is a crucial protein structure for flow properties while boundary conditions play a role of the driving force. Their…

数值分析 · 数学 2021-06-09 Weizhang Huang , Weishi Liu , Yufei Yu

The main goal of this work is to examine the qualitative effect of ion sizes via a steady-state boundary value problem. We study a one-dimensional version of a Poisson-Nernst-Planck system with a local hard-sphere potential model for ionic…

数学物理 · 物理学 2022-03-18 Weishi Liu , Hamid Mofidi

This study investigates the flux ratios of ionic flows using Poisson-Nernst-Planck (PNP) models. The flux ratio measures the effect of permanent charge on the ion fluxes and can exhibit bifurcation, where a small parameter change causes a…

动力系统 · 数学 2023-11-07 Hamid Mofidi

In this paper, based on geometric singular perturbation analysis of a quasi-one dimensional Poisson-Nernst-Planck model for ionic flows, we study the problem of zero current condition for ionic flows through membrane channels with a simple…

动力系统 · 数学 2020-09-22 Hamid Mofidi , Weishi Liu

This work examines the geometric mean of concentrations and its behavior in various situations, as well as the reversal permanent charge problem, the charge sharing seen in x-ray diffraction. Observations are obtained from analytical…

统计力学 · 物理学 2020-09-22 Hamid Mofidi

We investigate Ussing's unidirectional fluxes and flux ratios of charged tracers motivated particularly by the insightful proposal of Hodgkin and Keynes on a relation between flux ratios and channel structure. Our study is based on analysis…

其他定量生物学 · 定量生物学 2016-12-30 Shuguan Ji , Bob Eisenberg , Weishi Liu

In this work, the dependence of reversal potentials and zero-current fluxes on diffusion coefficients are examined for ionic flows through membrane channels. The study is conducted for the setup of a simple structure defined by the profile…

软凝聚态物质 · 物理学 2019-12-17 Bob Eisenberg , Weishi Liu , Hamid Mofidi

We investigate the effects of the relative dielectric coefficient on ionic flows in open ion channels, using mathematical analysis of reasonably general Poisson-Nernst-Planck type models that can include the finite sizes of ions. The value…

生物大分子 · 定量生物学 2017-10-03 Bob Eisenberg , Weishi Liu

The flow of ions through permeable channels causes voltage drop in physiological nanodomains such as synapses, dendrites and dendritic spines, and other protrusions. How the voltage changes around channels in these nanodomains has remained…

软凝聚态物质 · 物理学 2025-01-10 Frédéric Paquin-Lefebvre , David Holcman

The molecular mechanism of ion channel gating and substrate modulation is elusive for many voltage gated ion channels, such as eukaryotic sodium ones. The understanding of channel functions is a pressing issue in molecular biophysics and…

生物大分子 · 定量生物学 2016-11-15 Duan Chen , Guowei Wei

We discuss various models of ion transport through cell membrane channels. Recent experimental data shows that sizes of ion channels are compared to those of ions and that only few ions may be simultaneously in any single channel.…

亚细胞过程 · 定量生物学 2007-06-06 Jan Gomulkiewicz , Jacek Miekisz , Stanislaw Miekisz

A Poisson-Nernst-Planck-Fermi (PNPF) theory is developed for studying ionic transport through biological ion channels. Our goal is to deal with the finite size of particle using a Fermi like distribution without calculating the forces…

生物物理 · 物理学 2015-06-23 Jinn-Liang Liu , Bob Eisenberg

We present a finite volume scheme for modeling the diffusion of charged particles, specifically ions, in constrained geometries using a degenerate Poisson-Nernst-Planck system with size exclusion yielding cross-diffusion. Our method…

数值分析 · 数学 2026-03-04 Clément Cancès , Maxime Herda , Annamaria Massimini

The reduced 1D Poisson-Nernst-Planck (PNP) model of artificial nanopores in the presence of a permanent charge on the channel wall is studied. More specifically, we consider the limit where the channel length exceed much the Debye screening…

化学物理 · 物理学 2008-11-23 I. D. Kosińska , I. Goychuk , M. Kostur , G. Schmid , P. Hänggi

Effective Poisson-Nernst-Planck (PNP) equations are derived for macroscopic ion transport in charged porous media under periodic fluid flow by an asymptotic multi-scale expansion with drift. The microscopic setting is a two-component…

数学物理 · 物理学 2014-07-16 Markus Schmuck , Martin Z. Bazant

We consider ionic electrodiffusion in fluids, described by the Nernst-Planck-Navier-Stokes system in bounded domains, in two dimensions, with Dirichlet boundary conditions for the Navier-Stokes and Poisson equations, and blocking (vanishing…

偏微分方程分析 · 数学 2018-12-26 Peter Constantin , Mihaela Ignatova

We study global dynamics of the Poisson-Nernst-Planck (PNP) system for flows of two types of ions through a narrow tubular-like membrane channel. As the radius of the cross-section of the three-dimensional tubular-like membrane channel…

偏微分方程分析 · 数学 2015-05-13 Weishi Liu , Bixiang Wang

This work is concerned with the stationary Poisson--Nernst--Planck equation with a large parameter which describes a huge number of ions occupying an electrolytic region. Firstly, we focus on the model with a single specie of positive…

偏微分方程分析 · 数学 2023-11-20 Jhih-Hong Lyu , Chiun-Chang Lee , Tai-Chia Lin
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