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Halogen bonding has emerged as an important noncovalent interaction in a myriad of applications, including drug design, supramolecular assembly, and catalysis. Current understanding of the halogen bond is informed by electronic structure…

化学物理 · 物理学 2019-05-23 Richard C. Remsing , Michael L. Klein

The intermolecular interactions in the title compound are investigated using self-consistent charge density functional based tight binding molecular dynamics. Emphasis is put on the analysis of correlated motions of ion pairs using ideas of…

化学物理 · 物理学 2016-03-22 Tobias Zentel , Oliver Kühn

Isothermal-isobaric molecular dynamics simulations have been performed to examine a broad set of properties of the model water-1,2-dimethoxyethane (DME) mixture as a function of composition. The SPC-E and TIP4P-Ew water models and the…

软凝聚态物质 · 物理学 2017-10-04 J. Gujt , H. Dominguez , S. Sokolowski , O. Pizio

This paper is a numerical study of the condensation of the warm neutral medium (WNM) into cold neutral medium (CNM) structures under the effect of turbulence and thermal instability. Using low resolution simulations we explored the impact…

星系天体物理 · 物理学 2014-07-09 E. Saury , M. -A. Miville-Deschênes , P. Hennebelle , E. Audit , W. Schmidt

Novel experimental and computational studies have uncovered the proton momentum distribution in hydrogen bonded systems. In this work, we utilize recently developed open path integral Car-Parrinello molecular dynamics methodology in order…

统计力学 · 物理学 2015-05-13 Joseph A. Morrone , Lin Lin , Roberto Car

We report molecular-dynamics simulation results performed for a model of molecular liquid orthoterphenyl in supercooled states, which we then compare with both experimental data and mode-coupling-theory (MCT) predictions, aiming at a better…

软凝聚态物质 · 物理学 2009-11-10 S. -H. Chong , F. Sciortino

We investigate the connection between local structure and dynamical heterogeneity in supercooled liquids. Through the study of four different models we show that the correlation between a particle's mobility and the degree of local order in…

统计力学 · 物理学 2014-10-20 Glen M. Hocky , Daniele Coslovich , Atsushi Ikeda , David R. Reichman

We formulate a time-dependent density functional theory for the coupled dynamics of electrons and nuclei that goes beyond the Born-Oppenheimer (BO) approximation. We prove that the time-dependent marginal nuclear probability density…

化学物理 · 物理学 2025-11-14 Chen Li , Ryan Requist , E. K. U. Gross

We present a first-principles formalism for studying dynamical heterogeneities in glass forming liquids. Based on the Non-Equilibrium Self-Consistent Generalized Langevin Equation theory, we were able to describe the time-dependent local…

软凝聚态物质 · 物理学 2022-04-06 J. Lira-Escobedo , J. R. Velez-Cordero , Pedro E. Ramírez-González

The hydrogen-bond (H-bond) network of high-pressure water is investigated by neural-network-based molecular dynamics (MD) simulations with the first-principles accuracy. The static structure factors (SSFs) of water at three densities, i.e.,…

化学物理 · 物理学 2023-08-04 Renxi Liu , Mohan Chen

We investigate the local structural fluctuations of a model equilibrium fluid with an aim of better understanding the structural basis of locally heterogeneous dynamics identified in recent simulations and experimental studies of…

软凝聚态物质 · 物理学 2018-11-14 Tamoghna Das , Jack F. Douglas

Monte Carlo computer simulations in the canonical and grand canonical statistical ensemble were used to explore the properties of the central force (CF1) water model. The intramolecular structure of the H$_2$O molecule is well reproduced by…

软凝聚态物质 · 物理学 2021-10-12 V. Ravnik , B. Hribar-Lee , O. Pizio , M. Luksic

First-principle based molecular-dynamics simulations have been performed for binary Cu$_x$Ti$_{1-x}$ (x = 0.31, 0.50, and 0.76) alloys to investigate the relationship between local structure and dynamical properties in the liquid and…

材料科学 · 物理学 2024-12-06 Lucas P. Kreuzer , Fan Yang , Andreas Mayer , Noel Jakse

The properties of the hydrogen bonds in ethylammonium nitrate are analyzed by using molecular dynamics simulations and infrared as well as nuclear magnetic resonance experiments. Ethylammonium nitrate features a flexible three-dimensional…

化学物理 · 物理学 2018-02-14 Tobias Zentel , Viviane Overbeck , Dirk Michalik , Oliver Kühn , Ralf Ludwig

We present two methods for computing the dynamic structure factor for warm dense hydrogen without invoking either the Born-Oppenheimer approximation or the Chihara decomposition, by employing a wave-packet description that resolves the…

Binary mixtures of water with lower alcohols display non-linear phase behaviour upon mixing which are attributed to potential cluster formation at molecular level. Unravelling such elusive structures requires the investigation of…

软凝聚态物质 · 物理学 2023-10-09 Riccardo Morbidini , Robert M. Edkins , Mark Devonport , Gøran Nilsen , Tilo Seydel , Katharina Edkins

Analysis of the electron density distribution in clusters composed of hydrogen fluoride, water, and ammonia molecules, especially within the hydrogen-bond domains, reveals the existence of both \sigma- and \pi-binding between molecules. The…

化学物理 · 物理学 2024-05-08 Yulia V. Novakovskaya

The stationary nonempirical simulations of Na+(H2O)n clusters with n in a range of 28 to 51 carried out at the density functional level with a hybrid B3LYP functional and the Born-Oppenheimer molecular dynamics modeling of the size selected…

化学物理 · 物理学 2024-05-08 Yulia V. Novakovskaya

We investigate the equilibrium geometries and the systematics of bonding in various isomers of a 24-atom boron cluster using Born-Oppenheimer molecular dynamics within the framework of density functional theory. The isomers studied are the…

原子与分子团簇 · 物理学 2009-11-10 S. Chacko , D. G. Kanhere , I. Boustani

We study the conformational dynamics within homo-polymer globules by solvent-implicit Brownian dynamics simulations. A strong dependence of the internal chain dynamics on the Lennard-Jones cohesion strength {\epsilon} and the globule size…

软凝聚态物质 · 物理学 2019-08-15 Thomas R. Einert , Charles E. Sing , Alfredo Alexander-Katz , Roland R. Netz