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相关论文: A general multi-scale description of metastable ad…

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We consider a stochastic model of population dynamics where each individual is characterised by a trait in {0,1,...,L} and has a natural reproduction rate, a logistic death rate due to age or competition and a probability of mutation…

概率论 · 数学 2019-02-12 Anton Bovier , Loren Coquille , Charline Smadi

We consider a stochastic individual-based model of adaptive dynamics for an asexually reproducing population with mutation. Biologically motivated by the influence of seasons or the variation of drug concentration during medical treatment,…

概率论 · 数学 2025-03-26 Manuel Esser , Anna Kraut

I discuss the so-called stochastic individual based model of adaptive dynamics and in particular how different scaling limits can be obtained by taking limits of large populations, small mutation rate, and small effect of single mutations…

种群与进化 · 定量生物学 2021-07-06 Anton Bovier

We analytically study the dynamics of evolving populations that exhibit metastability on the level of phenotype or fitness. In constant selective environments, such metastable behavior is caused by two qualitatively different mechanisms.…

adap-org · 物理学 2007-05-23 Erik van Nimwegen , James P. Crutchfield

We consider a stochastic individual-based model for the evolution of a haploid, asexually reproducing population. The space of possible traits is given by the vertices of a (possibly directed) finite graph $G=(V,E)$. The evolution of the…

概率论 · 数学 2020-03-10 Loren Coquille , Anna Kraut , Charline Smadi

We consider an asexually reproducing population on a finite type space whose evolution is driven by exponential birth, death and competition rates, as well as the possibility of mutation at a birth event. On the individual-based level this…

种群与进化 · 定量生物学 2020-02-10 Anna Kraut , Anton Bovier

Evolution in changing environments is an important, but little studied aspect of the theory of evolution. The idea of adaptive walks in fitness landscapes has triggered a vast amount of research and has led to many important insights about…

生物物理 · 物理学 2007-05-23 Claus O. Wilke

We analyze the population dynamics of a broad class of fitness functions that exhibit epochal evolution---a dynamical behavior, commonly observed in both natural and artificial evolutionary processes, in which long periods of stasis in an…

adap-org · 物理学 2007-05-23 James P. Crutchfield , Erik van Nimwegen

On rugged fitness landscapes where sign epistasis is common, adaptation can often involve either individually beneficial "uphill" mutations or more complex mutational trajectories involving fitness valleys or plateaus. The dynamics of the…

种群与进化 · 定量生物学 2015-10-06 Ian E. Ochs , Michael M. Desai

We present a model for the dynamics of a population of bacteria with a continuum of traits, who compete for resources and exchange horizontally (transfer) an otherwise vertically inherited trait with possible mutations. Competition…

We consider a fitness-structured population model with competition and migration between nearest neighbors. Under a combination of large population and rare migration limits we are particularly interested in the asymptotic behavior of the…

概率论 · 数学 2012-07-20 Anton Bovier , Shi-Dong Wang

We are interested in the impact of natural selection in a prey-predator community. We introduce an individual-based model of the community that takes into account both prey and predator phenotypes. Our aim is to understand the phenotypic…

种群与进化 · 定量生物学 2015-02-19 Manon Costa , Céline Hauzy , Nicolas Loeuille , Sylvie Méléard

Adaptive dynamics so far has been put on a rigorous footing only for clonal inheritance. We extend this to sexually reproducing diploids, although admittedly still under the restriction of an unstructured population with Lotka-Volterra-like…

概率论 · 数学 2011-11-29 Pierre Collet , Sylvie Méléard , J. A. J. Metz

We are interested in the study of models describing the evolution of a polymorphic population with mutation and selection in the specific scales of the biological framework of adaptive dynamics. The population size is assumed to be large…

概率论 · 数学 2011-12-05 Nicolas Champagnat , Sylvie Méléard

Evolutionary adaptation is the process that increases the fit of a population to the fitness landscape it inhabits. As a consequence, evolutionary dynamics is shaped, constrained, and channeled, by that fitness landscape. Much work has been…

种群与进化 · 定量生物学 2010-12-17 Bjørn Østman , Arend Hintze , Christoph Adami

The class of epistatic fitness landscapes is much more diverse than the class of non-epistatic landscapes, and so it stands to reason that there exist dynamical phenomena that can only be realized in the presence of epistasis. Here, we…

种群与进化 · 定量生物学 2015-03-10 David M. McCandlish , Jakub Otwinowski , Joshua B. Plotkin

Evolution is a dynamic process. The two classical forces of evolution are mutation and selection. Assuming small mutation rates, evolution can be predicted based solely on the fitness differences between phenotypes. Predicting an…

种群与进化 · 定量生物学 2015-03-23 Benedikt Bauer , Chaitanya S. Gokhale

Molecular phenotypes link genomic information with organismic functions, fitness, and evolution. Quantitative traits are complex phenotypes that depend on multiple genomic loci. In this paper, we study the adaptive evolution of a…

种群与进化 · 定量生物学 2015-06-19 Torsten Held , Armita Nourmohammad , Michael Lässig

We consider an interacting particle Markov process for Darwinian evolution in an asexual population with non-constant population size, involving a linear birth rate, a density-dependent logistic death rate, and a probability $\mu$ of…

概率论 · 数学 2007-05-23 Nicolas Champagnat

How the neutral diversity is affected by selection and adaptation is investigated in an eco-evolutionary framework. In our model, we study a finite population in continuous time, where each individual is characterized by a trait under…

概率论 · 数学 2019-08-15 Sylvain Billiard , Regis Ferriere , Sylvie Méléard , Viet Chi Tran
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