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This paper provides theoretical and computational developments in statistical shape analysis of shape graphs, and demonstrates them using analysis of complex data from retinal blood-vessel (RBV) networks. The shape graphs are represented by…

统计方法学 · 统计学 2022-11-29 Aditi Basu Bal , Xiaoyang Guo , Tom Needham , Anuj Srivastava

We present a novel approach to automatically segment magnetic resonance (MR) images of the human brain into anatomical regions. Our methodology is based on a deep artificial neural network that assigns each voxel in an MR image of the brain…

计算机视觉与模式识别 · 计算机科学 2015-06-26 Alexandre de Brebisson , Giovanni Montana

Graphs are a natural representation of brain activity derived from functional magnetic imaging (fMRI) data. It is well known that clusters of anatomical brain regions, known as functional connectivity networks (FCNs), encode temporal…

机器学习 · 计算机科学 2023-01-30 Alexander Campbell , Simeon Spasov , Nicola Toschi , Pietro Lio

Traditional functional connectivity based on functional magnetic resonance imaging (fMRI) can only capture pairwise interactions between brain regions. Hypergraphs, which reveal high-order relationships among multiple brain regions, have…

神经元与认知 · 定量生物学 2025-05-20 Wenqi Hu , Xuerui Su , Guanliang Li , Yidi Pan , Aijing Lin

This study explores the potential of graph neural networks (GNNs) to enhance semantic segmentation across diverse image modalities. We evaluate the effectiveness of a novel GNN-based U-Net architecture on three distinct datasets: PascalVOC,…

计算机视觉与模式识别 · 计算机科学 2025-01-22 Aryan Singh , Pepijn Van de Ven , Ciarán Eising , Patrick Denny

Brain imaging data such as EEG or MEG are high-dimensional spatiotemporal data often degraded by complex, non-Gaussian noise. For reliable analysis of brain imaging data, it is important to extract discriminative, low-dimensional intrinsic…

计算机视觉与模式识别 · 计算机科学 2017-05-16 Yiluan Guo , Hossein Nejati , Ngai-Man Cheung

We present a structural graph reasoning framework that incorporates explicit anatomical priors for explainable vision-based diagnosis. Convolutional feature maps are reinterpreted as patch-level graphs, where nodes encode both appearance…

计算机视觉与模式识别 · 计算机科学 2026-01-21 Khaled Berkani

Segmenting the retinal vasculature entails a trade-off between how much of the overall vascular structure we identify vs. how precisely we segment individual vessels. In particular, state-of-the-art methods tend to under-segment faint…

计算机视觉与模式识别 · 计算机科学 2019-03-28 Aashis Khanal , Rolando Estrada

Understanding the evolution of brain functional networks over time is of great significance for the analysis of cognitive mechanisms and the diagnosis of neurological diseases. Existing methods often have difficulty in capturing the…

机器学习 · 计算机科学 2025-10-30 Tianqi Guo , Liping Chen , Ciyuan Peng , Jingjing Zhou , Jing Ren

The brain is a complex system comprising a myriad of interacting elements, posing significant challenges in understanding its structure, function, and dynamics. Network science has emerged as a powerful tool for studying such intricate…

Convolutional networks are powerful visual models that yield hierarchies of features. We show that convolutional networks by themselves, trained end-to-end, pixels-to-pixels, improve on the previous best result in semantic segmentation. Our…

计算机视觉与模式识别 · 计算机科学 2016-05-23 Evan Shelhamer , Jonathan Long , Trevor Darrell

The inception of spatial transcriptomics has allowed improved comprehension of tissue architectures and the disentanglement of complex underlying biological, physiological, and pathological processes through their positional contexts.…

机器学习 · 计算机科学 2023-02-02 Junaid Ahmed , Alhassan S. Yasin

Cytoarchitecture describes the spatial organization of neuronal cells in the brain, including their arrangement into layers and columns with respect to cell density, orientation, or presence of certain cell types. It allows to segregate the…

图像与视频处理 · 电气工程与系统科学 2022-01-02 Christian Schiffer , Stefan Harmeling , Katrin Amunts , Timo Dickscheid

Automated cardiac segmentation from magnetic resonance imaging datasets is an essential step in the timely diagnosis and management of cardiac pathologies. We propose to tackle the problem of automated left and right ventricle segmentation…

计算机视觉与模式识别 · 计算机科学 2017-04-28 Phi Vu Tran

Branching in vascular networks and in overall organismic form is one of the most common and ancient features of multicellular plants, fungi, and animals. By combining machine-learning techniques with new theory that relates vascular form to…

Brain imaging of mental health, neurodevelopmental and learning disorders has coupled with machine learning to identify patients based only on their brain activation, and ultimately identify features that generalize from smaller samples of…

图像与视频处理 · 电气工程与系统科学 2020-07-21 Laura Tomaz Da Silva , Nathalia Bianchini Esper , Duncan D. Ruiz , Felipe Meneguzzi , Augusto Buchweitz

Understanding how the spatial structure of blood vessel networks relates to their function in healthy and abnormal biological tissues could improve diagnosis and treatment for diseases such as cancer. New imaging techniques can generate…

The concept of multilayer networks has become recently integrated into complex systems modeling since it encapsulates a very general concept of complex relationships. Biological pathways are an example of complex real-world networks, where…

人机交互 · 计算机科学 2021-10-12 Hsiang-Yun Wu , Martin Nöllenburg , Ivan Viola

The fast advancement of Large Vision-Language Models (LVLMs) has shown immense potential. These models are increasingly capable of tackling abstract visual tasks. Geometric structures, particularly graphs with their inherent flexibility and…

计算机视觉与模式识别 · 计算机科学 2024-11-25 Camilo Chacón Sartori , Christian Blum , Filippo Bistaffa

Converging evidence suggests that the mammalian ventral visual pathway encodes increasingly complex stimulus features in downstream areas. Using deep convolutional neural networks, we can now quantitatively demonstrate that there is indeed…

神经元与认知 · 定量生物学 2017-03-13 Umut Güçlü , Marcel A. J. van Gerven