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Statistical shape modeling aims at capturing shape variations of an anatomical structure that occur within a given population. Shape models are employed in many tasks, such as shape reconstruction and image segmentation, but also shape…

计算机视觉与模式识别 · 计算机科学 2022-09-16 David Lüdke , Tamaz Amiranashvili , Felix Ambellan , Ivan Ezhov , Bjoern Menze , Stefan Zachow

Although the preservation of shape continuity and physiological anatomy is a natural assumption in the segmentation of medical images, it is often neglected by deep learning methods that mostly aim for the statistical modeling of input data…

计算机视觉与模式识别 · 计算机科学 2023-05-01 Yousef Yeganeh , Azade Farshad , Goktug Guevercin , Amr Abu-zer , Rui Xiao , Yongjian Tang , Ehsan Adeli , Nassir Navab

The deviation between chronological age and biological age is a well-recognized biomarker associated with cognitive decline and neurodegeneration. Age-related and pathology-driven changes to brain structure are captured by various…

机器学习 · 计算机科学 2022-11-01 Saurabh Sihag , Gonzalo Mateos , Corey McMillan , Alejandro Ribeiro

Large-scale neuronal activity recordings with fluorescent calcium indicators are increasingly common, yielding high-resolution 2D or 3D videos. Traditional analysis pipelines reduce this data to 1D traces by segmenting regions of interest,…

Cognition involves dynamic reconfiguration of functional brain networks at sub-second time scale. A precise tracking of these reconfigurations to categorize visual objects remains elusive. Here, we use dense electroencephalography (EEG)…

神经元与认知 · 定量生物学 2017-06-05 Ahmad Mheich , Mahmoud Hassan , Fabrice Wendling

The mammalian brain is a densely interconnected network that consists of millions to billions of neurons. Decoding how information is represented and processed by this neural circuitry requires the ability to capture and manipulate the…

生物物理 · 物理学 2018-05-10 Siegfried Weisenburger , Alipasha Vaziri

Developing automated and semi-automated solutions for reconstructing wiring diagrams of the brain from electron micrographs is important for advancing the field of connectomics. While the ultimate goal is to generate a graph of neuron…

计算机视觉与模式识别 · 计算机科学 2016-08-09 William Gray Roncal , Colin Lea , Akira Baruah , Gregory D. Hager

Empirical studies of graphs have contributed enormously to our understanding of complex systems. Known today as network science, what was originally a theoretical study of graphs has grown into a more scientific exploration of communities…

定量方法 · 定量生物学 2020-01-01 Ryan E. Langendorf , Debra S. Goldberg

Memory is an important cognitive function for humans. How a brain with such a small power can complete such a complex memory function, the working mechanism behind this is undoubtedly fascinating. Engram theory views memory as the…

分布式、并行与集群计算 · 计算机科学 2023-07-13 Hui Wei , Weihua Miao , Fushun Li

We propose the first joint-task learning framework for brain and vessel segmentation (JoB-VS) from Time-of-Flight Magnetic Resonance images. Unlike state-of-the-art vessel segmentation methods, our approach avoids the pre-processing step of…

图像与视频处理 · 电气工程与系统科学 2023-04-18 Natalia Valderrama , Ioannis Pitsiorlas , Luisa Vargas , Pablo Arbeláez , Maria A. Zuluaga

Identifying cerebral cortex layers is crucial for comparative studies of the cytoarchitecture aiming at providing insights into the relations between brain structure and function across species. The absence of extensive annotated datasets…

计算机视觉与模式识别 · 计算机科学 2023-11-28 Valentina Vadori , Antonella Peruffo , Jean-Marie Graïc , Giulia Vadori , Livio Finos , Enrico Grisan

The exploration of Graph Neural Networks (GNNs) for processing graph-structured data has expanded, particularly their potential for causal analysis due to their universal approximation capabilities. Anticipated to significantly enhance…

机器学习 · 计算机科学 2024-01-30 Simi Job , Xiaohui Tao , Taotao Cai , Lin Li , Haoran Xie , Jianming Yong

Functional brain graphs are often characterized with separate graph-theoretic or spectral descriptors, overlooking how these properties covary and partially overlap across brains and conditions. We anticipate that dense, weighted functional…

神经元与认知 · 定量生物学 2025-11-07 Subati Abulikemu , Tiago Azevedo , Michail Mamalakis , John Suckling

Understanding how local neurophysiological patterns interact with global brain dynamics is essential for decoding human emotions from EEG signals. However, existing deep learning approaches often overlook the brain's intrinsic spatial…

人机交互 · 计算机科学 2026-01-16 Yijin Zhou , Fu Li , Yi Niu , Boxun Fu , Huaning Wang , Lijian Zhang

Cardiovascular magnetic resonance imaging is emerging as a crucial tool to examine cardiac morphology and function. Essential to this endeavour are anatomical 3D surface and volumetric meshes derived from CMR images, which facilitate…

Early diagnosis of Alzheimer's disease plays a key role in understanding the degree of the patient's mental decline and determining preventive therapies. In this study, we introduce WaveletBrain, a novel representation of the white and gray…

图像与视频处理 · 电气工程与系统科学 2019-07-16 Majid Masoumi , Matthew Toews , Herve Lombaert

Automatic and accurate whole-heart and great vessel segmentation from 3D cardiac magnetic resonance (MR) images plays an important role in the computer-assisted diagnosis and treatment of cardiovascular disease. However, this task is very…

计算机视觉与模式识别 · 计算机科学 2017-08-03 Lequan Yu , Jie-Zhi Cheng , Qi Dou , Xin Yang , Hao Chen , Jing Qin , Pheng-Ann Heng

Retinal artery/vein (A/V) classification plays a critical role in the clinical biomarker study of how various systemic and cardiovascular diseases affect the retinal vessels. Conventional methods of automated A/V classification are…

图像与视频处理 · 电气工程与系统科学 2020-07-21 Wenao Ma , Shuang Yu , Kai Ma , Jiexiang Wang , Xinghao Ding , Yefeng Zheng

In the realm of heterogeneous mixed autonomy, vehicles experience dynamic spatial correlations and nonlinear temporal interactions in a complex, non-Euclidean space. These complexities pose significant challenges to traditional…

多智能体系统 · 计算机科学 2024-08-19 Xin Gao , Zhaoyang Ma , Xueyuan Li , Xiaoqiang Meng , Zirui Li

Retinal blood vessel segmentation can extract clinically relevant information from fundus images. As manual tracing is cumbersome, algorithms based on Convolution Neural Networks have been developed. Such studies have used small publicly…

图像与视频处理 · 电气工程与系统科学 2024-06-24 Jeremiah Fadugba , Patrick Köhler , Lisa Koch , Petru Manescu , Philipp Berens
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